Gene
RNA
| Item | Value |
|---|---|
| gene id | G123247 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000024 |
| NCBI id | null |
| chromosome length | 8644187 |
| location | 2580165 ~ 2580507 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU139953 | False | 308 | lncRNA | 0.45 | 1 | 2580165 | 2580472 |
| TU139954 | True | 343 | lncRNA | 0.43 | 1 | 2580165 | 2580507 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000024_02555602_02562403 | ZSWIM2 | coding | downstream | 17233 | 2555283 ~ 2562932 (-) |
| CI01000024_02484606_02498687 | NA | coding | downstream | 80979 | 2475874 ~ 2503657 (-) |
| CI01000024_02421600_02456292 | BAZ2B | coding | downstream | 123873 | 2421600 ~ 2456292 (-) |
| CI01000024_02402657_02417463 | WDSUB1 | coding | downstream | 162104 | 2402413 ~ 2418061 (-) |
| CI01000024_02249593_02250941 | NA | coding | downstream | 329071 | 2249593 ~ 2251094 (-) |
| CI01000024_02597194_02605289 | NA | coding | upstream | 16244 | 2596751 ~ 2605289 (-) |
| CI01000024_02659912_02681156 | NA | coding | upstream | 79153 | 2659660 ~ 2684099 (-) |
| CI01000024_02712596_02739960 | COL5A2, COL5A2B | coding | upstream | 131366 | 2711873 ~ 2739960 (-) |
| CI01000024_02761265_02771248 | NA | coding | upstream | 180345 | 2760852 ~ 2771248 (-) |
| CI01000024_02771915_02777060 | NA | coding | upstream | 191299 | 2771806 ~ 2777060 (-) |
| G123235 | NA | non-coding | downstream | 23381 | 2556554 ~ 2556784 (-) |
| G123225 | NA | non-coding | downstream | 38062 | 2539014 ~ 2542103 (-) |
| G123229 | NA | non-coding | downstream | 42081 | 2535337 ~ 2538084 (-) |
| G123232 | NA | non-coding | downstream | 49859 | 2530051 ~ 2530306 (-) |
| G123230 | NA | non-coding | downstream | 50946 | 2528288 ~ 2529219 (-) |
| G123256 | NA | non-coding | upstream | 44088 | 2624595 ~ 2624835 (-) |
| G123324 | NA | non-coding | upstream | 197951 | 2778458 ~ 2779425 (-) |
| G123322 | NA | non-coding | upstream | 201523 | 2782030 ~ 2782980 (-) |
| G123334 | NA | non-coding | upstream | 203164 | 2783671 ~ 2783972 (-) |
| G123233 | NA | other | downstream | 25129 | 2547460 ~ 2555036 (-) |
| CI01000024_00825386_00837898 | NA | other | downstream | 1753314 | 824968 ~ 838550 (-) |
| CI01000024_03938368_03941795 | NA | other | upstream | 1355535 | 3938315 ~ 3941924 (-) |
| G125457 | NA | other | upstream | 4776730 | 7357237 ~ 7358104 (-) |
| G125798 | NA | other | upstream | 5395160 | 7975667 ~ 7976047 (-) |
