Gene
RNA
| Item | Value |
|---|---|
| gene id | G125725 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000024 |
| NCBI id | null |
| chromosome length | 8644187 |
| location | 7514304 ~ 7545425 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU142761 | True | 515 | lncRNA | 0.43 | 2 | 7514304 | 7545425 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000024_07433804_07468501 | COL28A2B, COL28A1, COL28A1A | coding | downstream | 45803 | 7433470 ~ 7468501 (-) |
| CI01000024_07424110_07430994 | KLHL41B | coding | downstream | 83310 | 7423927 ~ 7430994 (-) |
| CI01000024_07415578_07421136 | PPIG | coding | downstream | 93168 | 7415545 ~ 7421136 (-) |
| CI01000024_07413462_07414187 | PHOSPHO2 | coding | downstream | 100117 | 7413086 ~ 7414187 (-) |
| CI01000024_07402113_07409179 | SSB | coding | downstream | 104509 | 7401160 ~ 7409795 (-) |
| CI01000024_07549529_07561249 | RAD54L | coding | upstream | 4090 | 7549515 ~ 7561249 (-) |
| CI01000024_07566408_07567250 | NA | coding | upstream | 20853 | 7566278 ~ 7567250 (-) |
| CI01000024_07604312_07619531 | ST3GAL3, ST3GAL3A, ST3GAL3B | coding | upstream | 58887 | 7604312 ~ 7619531 (-) |
| CI01000024_07672858_07695341 | KDM4AB, KDM4A | coding | upstream | 127168 | 7672593 ~ 7695825 (-) |
| CI01000024_07697986_07832289 | PTPRFB, PTPRF, PTPRFA | coding | upstream | 152561 | 7697986 ~ 7832289 (-) |
| G125716 | NA | non-coding | downstream | 333 | 7513650 ~ 7513971 (-) |
| G125523 | NA | non-coding | downstream | 1176 | 7512878 ~ 7513128 (-) |
| G125476 | NA | non-coding | downstream | 76946 | 7436951 ~ 7437358 (-) |
| G125459 | NA | non-coding | downstream | 137041 | 7377034 ~ 7377263 (-) |
| G125386 | NA | non-coding | downstream | 227368 | 7284938 ~ 7286936 (-) |
| G125721 | NA | non-coding | upstream | 56924 | 7602349 ~ 7603171 (-) |
| G125760 | NA | non-coding | upstream | 116995 | 7662420 ~ 7662630 (-) |
| G125761 | NA | non-coding | upstream | 119025 | 7664450 ~ 7664658 (-) |
| G125763 | NA | non-coding | upstream | 121491 | 7666916 ~ 7667192 (-) |
| G125726 | NA | non-coding | upstream | 257148 | 7802573 ~ 7817487 (-) |
| G125457 | NA | other | downstream | 156200 | 7357237 ~ 7358104 (-) |
| CI01000024_03938368_03941795 | NA | other | downstream | 3572380 | 3938315 ~ 3941924 (-) |
| G123233 | NA | other | downstream | 4959268 | 2547460 ~ 2555036 (-) |
| CI01000024_00825386_00837898 | NA | other | downstream | 6687453 | 824968 ~ 838550 (-) |
| G125798 | NA | other | upstream | 430242 | 7975667 ~ 7976047 (-) |
