CI01000026_10351923_10354175 (CEBPG)


Basic Information

Item Value
gene id CI01000026_10351923_10354175
gene name CEBPG
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10351403 ~ 10356695 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_10351923_10354175.mRNA
GTTTAAAACGGTAACTTTAGCTCGGCATAGTTCTGCATGACTACGGAGTTTCCCTTCTCCCGTTTACAAAGGAGCGGGTGGGAGCGCGAGCGATGATGCAATCACGGGCAACACTTGAGCTCGCGCTCATATGAGAGAAAGAAAATTTGCCACATATGCACATTGACATGGCAGCCCGGTCGGATTACAACAACATAATGCTAACGGATGAGCACAAGCGGTTGACCCAACTTTCAGGTGTTGCAGCATTTTGCTGAAATAATAGTTTTTGCGCAAAGCATCTGTTCAGGTGGGGATTGTGTGCCAACAAAATATGTAAAAGTGTGATGGAGAATGATGCTGATGTGTGCAGAGTACCTTGTCTAACTTCTTTCTCTCCATTCTGTCTGGTTTTCAGGCACACGGCTGCATTTTGTGGCATTCAGCTTCACACAATACCAGCTAACACCAACTCCAGCTCTGCGAAGCCCGACAACATAGGTCGGAGAGGGTGAAAGAAAGACAGCGGAAGTGGATCCAAATGAACAAGCAGTTGCAACACAAGATATCCAACACAGATCAGAACGGTGTCAGTGTTATACAGAGTCAGCCTCATAATAGTGCATTAAACCCCGCAGGAGCTGCAGGACTACAGCAGGTTCCTCAATTAGTTCCAGTGAGTCCCGGAGGTGGGGGTAAGGCCACACCACCCAGCAAGATGAAGAAGGCTATTATGGATAAAGACAGCGACGAGTACCGCCAACGGAGAGAACGCAACAACCTGGCCGTAAAGAAGAGCCGCATGCGCAGCAAGCAGAAGGCGCAGGACACCCAGCAGCGCGTCAATGAGCTGAAGGAGGAGAATGAGAGACTTGAGGCCAAAATCAAATTGCTTAGCAAAGAACTGAGTGTGCTCAAAGACCTGTTTCTAGAGCATGCCCACAACCTCGCAGACAACGTGCAGCCCCCTGCTTCTGGAGGAGGCCCTGGAGACCTCTGCAACAACAACAACAACAGCAGTAACGGCAGCCAGTGAGGGCCTGATGTTAGTTTGCAGTATGCTATGCTGTGGGCTGTGTGGAGGCTCTCTAGGCAAATCATTTTACTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTGTCATTAATTACTCACCCTCATGTCGTTCCAAACTCATAAGACTTTCGTTCATCTTTGAAACACAAATGAAAATCTTTTTGATGAAATATGAGAGATTTCGGTCCCTCCTTTGACAGCTACGCAACTGACACTTTGATGCTTCAAAACGTTCATAAAGAGATCGTAAAAAACGAATCCATATGAATTGAGCAGTTTAGTCCAAATTTTCTGAAGAGACACACTTTATATGCTTTATTTATATGCTTTTATTTATTGCTTTATATGAGAAACAGATTTAATTTAGGCTTTTATTCACATATGAACATTGATCAACAGAACCTGCTTGACGTGCGAGAACAAACCTCTTACGGAAGCTCAAACGTGCTGAATAACCCACAAGAATGAACCTCTCAATTCTGGATTAGTTTTATGATCTCTTTATGAACTTTTTGAAGCGTCAAAGTGGTAGTTGCGTAGCTGTCAATGGAGGGAGAGAAATCTTCCAGATTTCATCAAAAAGACCTTCATTTGTGTTCAAACATGAACAAAAGCCTTACAGGTTTGGTACGACATGAGGGTGAGTAATTAATGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAAACGTATTATGCTTTCTTTCCCTCCTGTTCCTGGAATGTGTACTGTCCGCAGTGTTTAACTTGTGTGTCTTCTGTTTGTACACTCAAATTTATTTTCTTTTTCACTCATCTTGTATCTCGTGCCGAATGTTATGACATAATGGCCATAGCAACCACAGAAAGTCCAACCCACACTCTGATTTGATGTGCTGGAGATAACTTTTATTACTGCCTTTCAATTGTAAAGCAGCATGTTTCAGTGTCTTGAAACTTTGCAATAACTCAGAGGACTGTGAAAGCTTCTCGGTAGACAATTTTAAAATCCGGCCAAAGCTGGTCACAAAGGTTTGACAGTAAATAAGAGTAAATATGTTCAGTCACTCCACTCTATTGTCTGAAGATAGGATTCTAGGAAGCTAATAGACATTCCCAGGTGAAAAAAAAAAAAAGTACATTTCTATAATGTACTTAAAGTGCTCTATTTTCGTGCACTAATTTTGTACTTAATATACTAAAAATTCTTCTTTAGCACTTCTTAAGATAATCTTAAGAACATCTAAGTGTACTCAACAGTGCTATTTTGAGACACCATGAAATATGAACTAAAATGTGCTTTTAATATACTATTTCTGTATTTAAAAAATGTATTTAGATACTACTTGTAGTACATTTGAACCCATAGTGTACTACAAGTGGTAACTAAATATATTTTTTAAATACAGAGATAGTATATTAAAAGCACATTTTAGTTCATATTTCATGGTGTCTCAAAATAGCACAGCTACTTTTTTTTTTTTTTTTTTTTTTCTCCACCTGGGTTACCGCAGTCTGTTAACATTATTCATTATGATTTGGAATTAGGGCTGCCAGAAGTTTGATCAAGTAAGGATGTCTTCAAATGCAAAGAGTAGATATTTTGTATTCCTGCTTTTTTGCCTGTCAGCTTGGATTGATTTACACTCTTTATTTGTTGACCATGTCTTATAATAGCAAGTACACTGTTGTTTCTATGGTAACAGACTGTAGACAGACAAAATGTATTGCATCAGACTCCAGACAGTGTCTGCATTACCAGTAGTCCTTAAATCCCTACAGTTAAGCCTCCAATTTTGACAAGGGTGGAGAGGGAGAGATAGAGTAGAATATTAGCTCTAGCCTGTATGTTAGGGTGTTGGTAGCTAAATTAACACAAACTTCTTTCTTAACAGTAACTGTTGTGTCTGTGTAAATACTGTTGATGATGCAGATAAGATTTAGAATGACTGGTGCTGAACATTTAAAGTCATAAATCACCTGATGTGCCCCAAATTTATTAAATTATGAGTTATATTGAAAAGTTCCTTATCCGAAGAAGCTTTTATCTGACCACATCAAATTTTGGCCGTTTTGTTTCCCTGACCAGTCTCAGAAGTATGTGTGAATTTACATATGCGACAGCAGGTGTTACTAAAAGTTGATGGAACGGCCACGTGACCTTTGCCCTCATTGATTCTCATAGAGCTGTGTGTTCTTGGAGTCGCTGTAGATAGACTTTTGTACCTCAGGCTATATGTCATAGCCTCACCAGACAGCCTTTAAGATGTATATTCCTGTTTAAGAGAAATTTAAAAAGGAGGATAAGAAAAGACAAGGCAATCTCTTTAAGATGTCTGAAGCATCTTTAATTCTAATGTATATTTTCATTTTCTATACCTGAAGTTTTAAACATTAAAGCATGAAAGGCAATGCATGATTAGCACTATTTAAACAACTAATTAAAAATGATGCTCTATAGAGAAATAGCGAATCGGCGACTGCATACTTTTGTATTGTTGTATCAGGTTGGGCTAAA
>TU151513
GTTTGGTACGACATGAGGGTGAGTAATTAATGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAAACGTATTATGCTTTCTTTCCCTCCTGTTCCTGGAATGTGTACTGTCCGCAGTGTTTAACTTGTGTGTCTTCTGTTTGTACACTCAAATTTATTTTCTTTTTCACTCATCTTGTATCTCGTGCCGAATGTTATGACATAATGGCCATAGCAACCACAGAAAGTCCAACCCACACTCTGATTTGATGTGCTGGAGATAACTTTTATTACTGCCTTTCAATTGTAAAGCAGCATGTTTCAGTGTCTTGAAACTTTGCAATAACTCAGAGGACTGTGAAAGCTTCTCGGTAGACAATTTTAAAATCCGGCCAAAGCTGGTCACAAAGGTTTGACAGTAAATAAGAGTAAATATGTTCAGTCACTCCACTCTATTGTCTGAAGATAGGATTCTAGGAAGCTAATAGACATTCCCAGGTGAAAAAAAAAAAAAGTACATTTCTATAATGTACTTAAAGTGCTCTATTTTCGTGCACTAATTTTGTACTTAATATACTAAAAATTCTTCTTTAGCACTTCTTAAGATAATCTTAAGAACATCTAAGTGTACTCAACAGTGCTATTTTGAGACACCATGAAATATGAACTAAAATGTGC

Function

symbol description
cebpg Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription, DNA-templated. Is expressed in hematopoietic system and optic tectum. Orthologous to human CEBPG (CCAAT enhancer binding protein gamma).

GO:

id name namespace
GO:0003700 DNA-binding transcription factor activity molecular_function

KEGG:

id description
K10049 CEBPG; CCAAT/enhancer binding protein (C/EBP), gamma

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_10351923_10354175.mRNA False 3535 mRNA 0.39 2 10351403 10356695
TU151513 True 659 lncRNA 0.35 1 10354819 10355477

Neighbor

gene id symbol gene type direction distance location
CI01000026_10315650_10317985 NA coding upstream 33413 10315079 ~ 10317990 (+)
CI01000026_10265012_10268157 NA coding upstream 82855 10264945 ~ 10268548 (+)
CI01000026_10200749_10202405 NA coding upstream 148889 10198593 ~ 10202514 (+)
CI01000026_10136110_10149386 BRD7 coding upstream 201937 10135996 ~ 10149466 (+)
CI01000026_10124232_10124468 NA coding upstream 225568 10123916 ~ 10125835 (+)
CI01000026_10453245_10454111 NA coding downstream 96430 10453125 ~ 10454176 (+)
CI01000026_10455059_10456945 CNEP1R1, CNEP1R1.L, TM188 coding downstream 98364 10455059 ~ 10457563 (+)
CI01000026_10458602_10465979 GPATCH1 coding downstream 101907 10458602 ~ 10466513 (+)
CI01000026_10468478_10482863 LRP3 coding downstream 111783 10468478 ~ 10482955 (+)
CI01000026_10521984_10543018 RHPN2 coding downstream 165289 10521984 ~ 10543108 (+)
G133330 NA non-coding upstream 7337 10343711 ~ 10344066 (+)
G133329 NA non-coding upstream 7727 10343306 ~ 10343676 (+)
G133326 NA non-coding upstream 18602 10332594 ~ 10332801 (+)
G133324 NA non-coding upstream 23308 10327868 ~ 10328095 (+)
G133323 NA non-coding upstream 24547 10326657 ~ 10326856 (+)
G133336 NA non-coding downstream 16703 10373398 ~ 10373955 (+)
G133338 NA non-coding downstream 24559 10381254 ~ 10381549 (+)
G133339 NA non-coding downstream 24859 10381554 ~ 10381758 (+)
G133344 NA non-coding downstream 30347 10387042 ~ 10387244 (+)
G133373 NA non-coding downstream 158725 10515420 ~ 10515648 (+)
G133192 NA other upstream 189442 10159819 ~ 10161961 (+)
G132667 NA other upstream 782243 9568739 ~ 9569160 (+)
G131077 NA other upstream 1844616 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2051989 8297857 ~ 8307629 (+)
G130967 NA other upstream 2162330 8188374 ~ 8189073 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 714073 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 888238 11241496 ~ 11246204 (+)
G133542 NA other downstream 1119422 11476117 ~ 11477544 (+)

Expression


Co-expression Network