CI01000026_10453245_10454111


Basic Information

Item Value
gene id CI01000026_10453245_10454111
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10453125 ~ 10454176 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_10453245_10454111.mRNA
CCATAAAAGGATAACATGGTTAATATGCTTTATCACATCAAATTTCTTATACATTATAACAGTTTAAAATGGCTACATAAATTCTGTTAAAATTGTTGCATTGTTTCTTGTAGGGATATAATGGATCTGAAAGAGTACTTAAACAGGATTGGGTTTACTGGCCAATATGACAAAGCCAACCTGGACAGTTTGTTCACCATCCACAAGCTGCATGTTATGAATATTCCATTTGAGAACCTCAGCATCCACTGTGGCGAGAAGAACACTATGAATCTGCATACCATCTATAATAAAATAGTCAAGAGCAATCGGGGAGGCTGGTGTTGTGAAAACAATCTCTTGTTCTCATGGGTTCTAAAGGAGATGGGGTACAAATTCACCATACTAGGCGCCAAAGTGTTTAACTCGCTGGAAAAGGAGTACCTCCCCACGGACTGTCATCTCATCAATCTGGTGGAGATTGACGGGAAGCCGTACATTGCTGATGTGAGCTTTGGAGTGTCATACCAAATCTGGCATCCCTTAGAGCTGATCTCAGGTAAAGACCAGCCACAGCCTTCGGGTGTGTTCCGCCTCATAAATGACGGGGTGAAGTGGGTTCTGGAGAAGACTGGAAGGAAGCAAGTGGTCCAAGATAAGGCCTTTGCTAATTCTAGCCTCATTGACAAAAGGCTCATCAAAACAATGTACTCTTTCACATTAACACCCCGTGATGCTGACCATTTCCTGGAGACATCAGAGTACCTGCAGACTAATCCAGAATCTCTGTTCATGCTCAAATCCATTTGCTCCCTTCAGATGCCCACAGGTTTCAGAGCTCTGATTGGTTGGACGTACAGTGAGGTCACATTCAAAGAGGATACAGACTTGGTGGACATGAAAGAAATCCCAGATAGTGAGATAGAGGCTTTACTGAGGGAAAAGTTTAACCTGGTGTTAGTTAATAAATTCACACCTAAAAACAACAAAGTTAATTATTGCATCTAGTACTCAGCTAATCTACTCATCTAAAACTTTAGTACCCAGTGTGTTTTGTTTTAATATTAAGATGA

Function

NR:

description
Arylamine N-acetyltransferase, pineal gland isozyme NAT-10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_10453245_10454111.mRNA True 1052 mRNA 0.41 1 10453125 10454176

Neighbor

gene id symbol gene type direction distance location
CI01000026_10351923_10354175 CEBPG coding upstream 96430 10351403 ~ 10356695 (+)
CI01000026_10315650_10317985 NA coding upstream 135135 10315079 ~ 10317990 (+)
CI01000026_10265012_10268157 NA coding upstream 184577 10264945 ~ 10268548 (+)
CI01000026_10200749_10202405 NA coding upstream 250611 10198593 ~ 10202514 (+)
CI01000026_10136110_10149386 BRD7 coding upstream 303659 10135996 ~ 10149466 (+)
CI01000026_10455059_10456945 CNEP1R1, CNEP1R1.L, TM188 coding downstream 883 10455059 ~ 10457563 (+)
CI01000026_10458602_10465979 GPATCH1 coding downstream 4426 10458602 ~ 10466513 (+)
CI01000026_10468478_10482863 LRP3 coding downstream 14302 10468478 ~ 10482955 (+)
CI01000026_10521984_10543018 RHPN2 coding downstream 67808 10521984 ~ 10543108 (+)
CI01000026_10547566_10588420 CEP89 coding downstream 93095 10547271 ~ 10589071 (+)
G133344 NA non-coding upstream 65881 10387042 ~ 10387244 (+)
G133339 NA non-coding upstream 71367 10381554 ~ 10381758 (+)
G133338 NA non-coding upstream 71576 10381254 ~ 10381549 (+)
G133336 NA non-coding upstream 79170 10373398 ~ 10373955 (+)
G133373 NA non-coding downstream 61244 10515420 ~ 10515648 (+)
G133383 NA non-coding downstream 98784 10552960 ~ 10628076 (+)
G133406 NA non-coding downstream 330616 10784792 ~ 10785562 (+)
G133420 NA non-coding downstream 431877 10886053 ~ 10895159 (+)
G133426 NA non-coding downstream 453299 10907475 ~ 10907675 (+)
G133192 NA other upstream 291164 10159819 ~ 10161961 (+)
G132667 NA other upstream 883965 9568739 ~ 9569160 (+)
G131077 NA other upstream 1946338 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 2153711 8297857 ~ 8307629 (+)
G130967 NA other upstream 2264052 8188374 ~ 8189073 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 616592 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 790757 11241496 ~ 11246204 (+)
G133542 NA other downstream 1021941 11476117 ~ 11477544 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_033918 si:dkey-78a14.4 coding NC_007118.7 CM002891.2 38249858 ~ 38257848 (+)