CI01000026_11698637_11702653 (MAF1.L, MAF1)


Basic Information

Item Value
gene id CI01000026_11698637_11702653
gene name MAF1.L, MAF1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11698637 ~ 11703649 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_11698637_11702653.mRNA
TTATGAAGCTTTTAGAGAATTCCCGTTTTGAGGCTTTGAGCTCCCAGCTGTGTGTTGAAACTGGAGACGCTCACATCCTTGGCAGGATCGAGAGTTACTCGTGTAAGATGGCTGGTGATGACAAGCACATGTTTAAGCAGTTCTGTCAGGAGGGGGAGCCACATGTACTGGAAGCTCTGTCCCCCCCTCAGTCCAGCAGCGCTCCGAGCCCTAACCTATTGGGGAAGAGTGGGGAGGATGGAGAGAACCCACTAAGTGATAAGTGTTGCAGGAAGACTTTGTTCTACCTTATCACCACCCTGAACGAGTCGTTCAGGCCTGATTATGACTTCAGTGCCGCCCGTGCCCATGAGTTCAGCCGAGAGCCCAGCGCTAACTGGGTGGCAGATTCTGTTAACAGCAGCCTTTATTCTGCTGTAGGGGAGCAGTTTAACACTTTAGGCCCAGAACTGTGGAATGCCATTGACCAAGAGATAAACCTGCAGAGCTGTGACATCTATAGCTACAACCCAGACCTTGACTCTGACCCCTTTGGTGAGGAAGGCAGCCTGTGGTCCTTCAACTACCTCTTTTACAACAAGAAACTTAAACGCATTGTATTCTTCACTTGCCGCTCAGTCAGTAGTTACGGTTGCAGTGGCCTTGACAATGAGTTGGACATGGAGCTGGATGATGATGAAGAGGAAGTGGACAGCTTCATGGAAGACAGGGTCCCCCGAGCTCTGTGTGTCTAAAGCTTCCTCAGGGATGACAACCTGAGCTTCAGCCAAAGGGCCTCGCCGATAACTTTGCACCCATTTTCTTATTTTTTCAAGGAAAAAAAAAAACTTTCAAACTTTATTTTCTGGGGATTTTCTTAAACGTGTGTGCTTAATTCTTACTTGTTCATTATGGACTGAGGAGGGGAAATATATGAGAGGAATTTATACCTCCCTCCCATTTGCCTCTAAAGAAGATCACAGACTGTGGGCTGAGAAGAGTCCCAAGAGAGCTGCTTAGACAAGGTTTGACATGGACTCATTTTAGGCTTTGGTGAGGCAGAGACAGTAAAAACCAGTGGAAACCAGCTCTCCCAGAAATGAAAGATAGTCACATTCAAACACCAGCATTTTGACCGTGGAAATGGGATGTGACATTCTTTTGTGCACACTTTGGACTATTAAGACTGCACGAGCACCATTTCTACCCCTTCCGTTTTATTGGTTCTCCTACTGTTTTCATAACTTGCTGGAGGGACGGGGGGGTTAACTGTAAGTTTTGAAGCAACTAACAGGTACTTCTCCCCTCTGTGTTTCCTGGGAATTAAACCCATGACCCTGGCATTGTTAGCACCATGCTCTAGCAAATATACAAGGCTAAATTTAAAAGATTTTTTTGTGCGTTTTATTTTTTTGTAAGCTTAATTATCTGAAATTCATTTATTTTAGTATACATTGACTGCACTGATTCTCTCTTTTTTATATTAAATGTCTGCAGGCTGCCATTGTTTTTTGACTCTATAATGTTGGCTTTGCTATGAAAACTGTTGTTACTTTTGCATAGTTCAAAGGTAAACATACAAACCAATTATTGTTTAATTTTTTTTTTTTTTTTTTTTGAATCTTGTTCATTTTTCATAACAATGTGAAATTTCAAAATAACAGTGCTGATATGGTAAGACAAATGTGAATGGAATCGGTCTCTTGTAGCCTTAGGATTTTGATTTTAAGGATGATTGAGCATCTGTGACA

Function

symbol description
maf1 Enables RNA polymerase III type 1 promoter sequence-specific DNA binding activity; RNA polymerase III type 2 promoter sequence-specific DNA binding activity; and RNA polymerase III type 3 promoter sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase I and negative regulation of transcription by RNA polymerase III. Located in nucleolus and nucleoplasm. Part of cytoplasm. Is active in nucleus.

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_11698637_11702653.mRNA True 1730 mRNA 0.43 7 11698637 11703649

Neighbor

gene id symbol gene type direction distance location
CI01000026_11497016_11677778 SORCS2 coding upstream 20859 11497016 ~ 11677778 (+)
CI01000026_11483300_11485455 TADA2B coding upstream 212557 11483300 ~ 11486080 (+)
CI01000026_11456632_11473446 TBC1D14 coding upstream 224984 11456632 ~ 11473653 (+)
CI01000026_11436071_11446054 KIAA0232 coding upstream 252315 11435501 ~ 11446322 (+)
CI01000026_11403059_11415298 PTPN5 coding upstream 283125 11403059 ~ 11415512 (+)
CI01000026_11705009_11707949 NA coding downstream 1360 11705009 ~ 11708076 (+)
CI01000026_11756587_11788914 ESYT2B coding downstream 52938 11756587 ~ 11789072 (+)
CI01000026_11792044_11807684 NCAPG2 coding downstream 88395 11792044 ~ 11808274 (+)
CI01000026_11809092_11810238 NA coding downstream 104813 11808462 ~ 11810411 (+)
CI01000026_11862091_11976290 PTPRN2 coding downstream 158442 11862091 ~ 11976290 (+)
G133572 NA non-coding upstream 39548 11658530 ~ 11659089 (+)
G133564 NA non-coding upstream 95751 11602202 ~ 11602886 (+)
G133542 NA non-coding upstream 221093 11476117 ~ 11477544 (+)
G133536 NA non-coding upstream 303393 11395044 ~ 11395244 (+)
G133512 NA non-coding upstream 329338 11368840 ~ 11369299 (+)
G133594 NA non-coding downstream 28162 11731811 ~ 11732814 (+)
G133596 NA non-coding downstream 30096 11733745 ~ 11734005 (+)
G133608 NA non-coding downstream 47516 11751165 ~ 11752175 (+)
G134141 NA non-coding downstream 157919 11861568 ~ 11891602 (+)
G134145 NA non-coding downstream 208572 11912221 ~ 11913432 (+)
CI01000026_11241496_11246081 NA other upstream 443564 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 619557 11075784 ~ 11079080 (+)
G133192 NA other upstream 1536676 10159819 ~ 10161961 (+)
G132667 NA other upstream 2129477 9568739 ~ 9569160 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_033955 MAF1 coding NC_007118.7 CM002891.2 40081630 ~ 40092016 (+)
bowfin (Amia calva) AMCG00019003 maf1 coding CM030124.1 CM030124.1 478027 ~ 496837 (-)