CI01000026_11705009_11707949


Basic Information

Item Value
gene id CI01000026_11705009_11707949
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11705009 ~ 11708076 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000026_11705009_11707949.mRNA
ATGGTTCTGTCTTTGGTGAACCTGTGCGCCCGGGAGGTAGTGAGCGACCACAGTTCTTCGCCGTATTGGTTAAGTTGTGTGCCGAGGGAGCTCTACCGAGCGCTGCTGGACGCCGCCTTCTCTCACTGCCGTCCTCTAGCCGTCGGTGAGCTCATCCAGCGGTGGCCTGAGCGAACACTGACTATAGGAGGCAGCAGAAAATCGGGCCAGTGCCTTCCGAACCGCCTCTGCGTTCAGGCTCTGCTGCTCGCTGTGGTCAGGGGATTGACGGACAAGAGGTGTTGCCTGCAGGTGCTGGATCTCAGTGGACTTCAGTGTGAGGATGTGAGAGTTGAAGACTCAATGGGTGGATGGTCCCTCACTGTTGCCCTCTGCTCAATGGTGCTACAAGCTCGAGCTGCTGCCTCCAGGGCTCACAGGAGAGATGGTGAAAGAGAGCGAAAAAGAGGGCTGGAAGTGGAGCGCGAACGGGGCGCTATCAAACGAGACCGGGGCAGTGTAGGGTGCGGGAATAGTGGTGAAGGGAGTCAGGGAGGAGACCGAGTGGAAGTAGTAGGGAAGATGGAGTGCAGAACTAATGAACGAACGTTACCAGACGTTGAGTCAGTAAAGGGTGTGAGAAGGAGGATGGAGATCCAGAGGAGAAAGATTTCATCTGAGGTGAAATCACACAATAGCAGTAATAACGGTAGTTTATGTGACCAAGACTGGGACGAGGTAGTTGTGGTCCATGTCAGGGCTGACTTATTTATCAATTCCCGTTCCTGGGAGCGCGTCCGTGATGCCCTTAGTCAACTGGGCCAATTGCAACTCCACTGCCGCTACCTTCGCGTGGAGGAACTCTCAGCTCCCTCTATAGCTTCCTTATTGGGTCTGTTGCCTCAGCAGGATCTCCTCGGTGTGGACATCCGCTACTCCAGCCTTGGGGTGTCTGGCCTGGCTATGTTGCTTCCACTGTTAGCTCCCTTCCCACAGCTTCACTCTCTCAGACTGCATTACTGTAACTTGGACTTGCAACGCACACAACCTGGCCAGCAGGGGGCCCTACAGGACATGTCGGAAGGACTGGGTTCACTGAAGAGATTGAAGAGATTATGCCTGACTGCACTCCGACTTCCAGGACACTTGCGCTTGCTGCTCAGCTCTCTTTCCCAGCCCCTGGAGGTGCTGGAGCTGCCATACCTGTGCCTGACCTCCACTGACCTGGCCTACCTCTCTTGCAGTCCTCATGCTTCATTCCTGAGAGAACTTGACCTGAGCGAGAACAGGCTTGATGAATCGTCCCTGCCCTCTCTGCGCCGTCTCTTAGGTCAAGCTGAAAGCTCCATGTCCCAGCTTTCACTTTGTGGTTGTGGCCTCTCAGACACTCTCTTGGGAGCTCTTCTCCCTTCCCTGTCCTGCTGTCGGGCTTTGCGTAGCTTAAGACTAGCCTTAAACCCGCTATCTAGGACAGGACTTCTTTCCCTGGCCCGTACAGCAGCAGGTATCCCTTCTCTTCGTCTGCTGCTCTATCCCAGTCCACTAGAGGAATATGAGCCTGGTCTGCCGGCTCTCCCCTCCAGTGCTCAGCTGCTGGACTGGCCTCTACTAGAGGAGCCTGAGGGCAGGGACTTGACGCTGAGGTTGCTGGATGAGGTTCTGAACTTGAAAGGGCGCTCCCAGGACCTTCTTGTGACCTCTGACCTTCTGAACTATAGCCCAGACTTGACTGTGGATGACACTTGACAATCAAAACTATGCTTAAACTAGTACTCTCAGCGTATGTTTTAACCACTCTTAGGGAATTTACTTGTGGTTGCCAAGCTTCTTCATGAAAAGCAAACCTTAGCTTAGACACACAGTCTTGTTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000026_11705009_11707949.mRNA True 1852 mRNA 0.54 3 11705009 11708076

Neighbor

gene id symbol gene type direction distance location
CI01000026_11698637_11702653 MAF1.L, MAF1 coding upstream 1360 11698637 ~ 11703649 (+)
CI01000026_11497016_11677778 SORCS2 coding upstream 27231 11497016 ~ 11677778 (+)
CI01000026_11483300_11485455 TADA2B coding upstream 218929 11483300 ~ 11486080 (+)
CI01000026_11456632_11473446 TBC1D14 coding upstream 231356 11456632 ~ 11473653 (+)
CI01000026_11436071_11446054 KIAA0232 coding upstream 258687 11435501 ~ 11446322 (+)
CI01000026_11756587_11788914 ESYT2B coding downstream 48511 11756587 ~ 11789072 (+)
CI01000026_11792044_11807684 NCAPG2 coding downstream 83968 11792044 ~ 11808274 (+)
CI01000026_11809092_11810238 NA coding downstream 100386 11808462 ~ 11810411 (+)
CI01000026_11862091_11976290 PTPRN2 coding downstream 154015 11862091 ~ 11976290 (+)
CI01000026_12074163_12076475 MNX1 coding downstream 365737 12073813 ~ 12077540 (+)
G133572 NA non-coding upstream 45920 11658530 ~ 11659089 (+)
G133564 NA non-coding upstream 102123 11602202 ~ 11602886 (+)
G133542 NA non-coding upstream 227465 11476117 ~ 11477544 (+)
G133536 NA non-coding upstream 309765 11395044 ~ 11395244 (+)
G133512 NA non-coding upstream 335710 11368840 ~ 11369299 (+)
G133594 NA non-coding downstream 23735 11731811 ~ 11732814 (+)
G133596 NA non-coding downstream 25669 11733745 ~ 11734005 (+)
G133608 NA non-coding downstream 43089 11751165 ~ 11752175 (+)
G134141 NA non-coding downstream 153492 11861568 ~ 11891602 (+)
G134145 NA non-coding downstream 204145 11912221 ~ 11913432 (+)
CI01000026_11241496_11246081 NA other upstream 449936 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 625929 11075784 ~ 11079080 (+)
G133192 NA other upstream 1543048 10159819 ~ 10161961 (+)
G132667 NA other upstream 2135849 9568739 ~ 9569160 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location