G132656


Basic Information

Item Value
gene id G132656
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 9550864 ~ 9551463 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU150868
TGGCGGTTACCTTCTTCTCGTCCATGGCAACGCCCTCCGAGCTGATGACGTAGCCGAGGAATGACGTGGATGTCTTGTGGAACTCACATTTTTCCACCTTGGCGTAGAGTTGATACTGGATTAGCCTCTGAAGAACCTGTCTGACCTGAGAGATATGTTCCTCCATATTATCTGAATAAATCAGAATGTCATCAATGTAAACGATTACAAATTTGTTTAACATGTCTCTGAATACGTCGTTGATAAAGGCCTGAAATACGGACGGACTATTGACCAGCCCGAAGGGCATAACAAGATATTCGTAGTGCCCAGTAGCCGTCGAGAATGCAGTTTTCCACTCGTCACCCTCTCTTATGCGGATTAGGTTATATGCACTGCGGAGATCAAGCTTGGTAAAGTACCTGGCTGTGCGAAGTTGTTCCAGAGCAGCGGGAACCAAAGGCAGTGGGTAGCGGAACTTAACTGTGATCTCATTTAGACCCCGGTCGTCAATGCAAGGGCGGAAACCCCCTCCTTCTTCCCCACGAAGAAGAAACCAGCAGATGCAGGTGAAGTAGACGGTCGAATAAATCCCTTGGCCAGTTCCTCCTCGATGTGTTT
>TU150867
GCCGAGGAATGACGTGGATGTCTTGTGGAACTCACATTTTTCCACCTTGGCGTAGAGTTGATACTGGATTAGCCTCTGAAGAACCTGTCTGACCTGAGAGATATGTTCCTCCATATTATCTGAATAAATCAGAATGTCATCAATGTAAACGATTACAAATTTGTTTAACATGTCTCTGAATACGTCGTTGATAAAGGCCTGAAATACGGACGGACTATTGACCAGCCCGAAGGGCATAACAAGATATTCGTAGTGCCCAGTAGCCGTCGAGAATGCAGTTTTCCACTCGTCACCCTCTCTTATGCGGATTAGGTTATATGCACTGCGGAGATCAAGCTTGGTAAAGTACCTGGCTGTGCGAAGTTGTTCCAGAGCAGCGGGAACCAAAGGCAGTGGGTAGCGGAACTTAACTGTGATCTCATTTAGACCCCGGTCGTCAATGCAAGGGCGGAAACCCCCTCCTTCTTCCCCACGAAGAAGAAACCAGCAGATGCAGGTGAAGTAGACGGTCGAATAAATCCCTTGGCCAGTTCCTCCTCGATGTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU150868 False 600 lncRNA 0.48 1 9550864 9551463
TU150867 True 548 lncRNA 0.47 1 9550916 9551463

Neighbor

gene id symbol gene type direction distance location
CI01000026_09365911_09428712 CHD9 coding upstream 121788 9364907 ~ 9429076 (+)
CI01000026_09339450_09352303 AKTIP coding upstream 197687 9339450 ~ 9353177 (+)
CI01000026_09175446_09178464 NA coding upstream 372376 9175249 ~ 9178488 (+)
CI01000026_09076625_09079154 IRX3A, IRX3 coding upstream 471526 9075216 ~ 9079338 (+)
CI01000026_08950735_08960908 NA coding upstream 589718 8950663 ~ 8961146 (+)
CI01000026_09602263_09635635 TOX3 coding downstream 50180 9601643 ~ 9636994 (+)
CI01000026_09666763_09669325 NA coding downstream 115217 9666680 ~ 9669702 (+)
CI01000026_09900193_09906874 SALL1A, SALL1 coding downstream 348730 9900193 ~ 9907237 (+)
CI01000026_09915483_09917692 NA coding downstream 363982 9915445 ~ 9917919 (+)
CI01000026_10124232_10124468 NA coding downstream 572453 10123916 ~ 10125835 (+)
G132657 NA non-coding upstream 204 9550152 ~ 9550660 (+)
G132655 NA non-coding upstream 1119 9549465 ~ 9549745 (+)
G132645 NA non-coding upstream 24676 9525972 ~ 9526188 (+)
G132637 NA non-coding upstream 31956 9518596 ~ 9518908 (+)
G132429 NA non-coding upstream 104832 9445830 ~ 9446032 (+)
G132658 NA non-coding downstream 252 9551715 ~ 9552074 (+)
G132659 NA non-coding downstream 891 9552354 ~ 9552554 (+)
G132664 NA non-coding downstream 11314 9562777 ~ 9562985 (+)
G132667 NA non-coding downstream 17276 9568739 ~ 9569160 (+)
G132783 NA non-coding downstream 122199 9673662 ~ 9673926 (+)
G131077 NA other upstream 1044077 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 1251450 8297857 ~ 8307629 (+)
G130967 NA other upstream 1361791 8188374 ~ 8189073 (+)
G130552 NA other upstream 2454212 7095053 ~ 7096652 (+)
G128757 NA other upstream 3224079 6326196 ~ 6326785 (+)
G133192 NA other downstream 608356 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 1519305 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 1693470 11241496 ~ 11246204 (+)
G133542 NA other downstream 1924654 11476117 ~ 11477544 (+)

Expression


Co-expression Network