G133188


Basic Information

Item Value
gene id G133188
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 10102019 ~ 10152201 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151437
TTATTTTTTTTTTTTTTAAGTGTAAAATGATTTATTCTGTAACAATGCATACAAAACGGAGGAGGACAGCAGGTGTGTTCCTCACAAACATTGCGGTACAGAAAGGCAGCACAATCTCAAACCATGTAAATTCAGTCACACTGTAACACTCACTGTGTGCTGAAAACCCAGAGAGGCACATAGGAATGGCAATCTAAATTTAACGTTTATGCCAATGGCTTCATTAGACACAAATACTTCACACTTTCACTAAGTATTCTCACAGAACAGAAGCAGAGACCATTTGAGCAAATCAATTTACTGCGATGTGAGCTAAGATGCACGACTACATCCATCCAGTGCGTCGTCAATTTACAACTTCAGATGAGAGAAGCCACAGAGCTATTTGGTCAAGATCTCAGACAGATTATGGGAAATCGATGAAAGTACATTTTCACTTTAAGATCATTGAATTTCAGTCATTTACATTTTCCCCCCAGTATATGTAAACATTCCTTAATAGTTTTCATCTGTAGCATATTATGAAGCTAAGGAAGGCCCATCTCCAACATCCACAATCTCAACTCAAAGGCAACAGCAAATCAACACTGCATGTCAAAATTTGGCATTCAAAACACTTGGCAGTTGTTTTTAAAGAAAAACAAACAAACAAAAAAGCATCCACAGTATGTAGATTCAAGCAAGAATAGGCATCCACCACTTTGCTGGTCCAAAAGTTTACAGAAAGATTGATAATAAAGGACACATTCGTTCAAATGACTAAAGAAATTCTAGATATTTTCACATCTGCTCGTCTGTGAAGGGTTTGTGTGGGTCAGGTGTTCCCTCTTCTGACCAGCTCAGTCATCCCAAATCAGTCTAAATCCAACAGGATCAAGGCCACTCTGACAGCAGTACCCAGAAAGTCTGAGAGCAATACTGAGAACCAGTATTTTTTTTTCTCTGCGAACTCAGATACCCACTGTCTGTGGTCTGTGTCCCATAAGAGGATCATGTGAGATGTGTGTATGTATATGTTGCTGCATATCTGAGAGTTTCAGGCCTCCAAATGCTGCCAAAACAAACTCTAACATGTCAAAATCAGAAAAAAAGTGCAGTTCTTTAGACATGCTCTAAAGAAACATCCAGTAGCAATAAAACATTCTTGAAAGAAAACAAAGAGATCACATATAGGTCCGGAGTCTGTGTGTGTGAAGCTGTCAGCGGCAGAGGATTCAGTCTCAGCTCAGACCGATGCCCTGCTGTTTGCTGGAATCTGTGCACACAAAAAAGGTTTTCAGCTCTCCTTTGCCCTTCACATTGATCAGGCCACGACACTCACATAAGTAGCCTAGCGTCTGCAGGACATCTGACGTCTCCTCTGTCACCTGCATTTACCCAGCTCTCCAGTGCTTTCCATACGACTGGCCACATTCACAGTGTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151437 True 1425 lncRNA 0.41 3 10102019 10152201

Neighbor

gene id symbol gene type direction distance location
CI01000026_09915483_09917692 NA coding upstream 184100 9915445 ~ 9917919 (+)
CI01000026_09900193_09906874 SALL1A, SALL1 coding upstream 194782 9900193 ~ 9907237 (+)
CI01000026_09666763_09669325 NA coding upstream 432317 9666680 ~ 9669702 (+)
CI01000026_09602263_09635635 TOX3 coding upstream 465025 9601643 ~ 9636994 (+)
CI01000026_09365911_09428712 CHD9 coding upstream 672943 9364907 ~ 9429076 (+)
CI01000026_10200749_10202405 NA coding downstream 46392 10198593 ~ 10202514 (+)
CI01000026_10265012_10268157 NA coding downstream 112744 10264945 ~ 10268548 (+)
CI01000026_10315650_10317985 NA coding downstream 162878 10315079 ~ 10317990 (+)
CI01000026_10351923_10354175 CEBPG coding downstream 199202 10351403 ~ 10356695 (+)
CI01000026_10453245_10454111 NA coding downstream 300924 10453125 ~ 10454176 (+)
G133153 NA non-coding upstream 33146 10068576 ~ 10068873 (+)
G132977 NA non-coding upstream 71508 10030239 ~ 10030511 (+)
G132974 NA non-coding upstream 79742 10022076 ~ 10022277 (+)
G132949 NA non-coding upstream 113356 9988139 ~ 9988663 (+)
G132950 NA non-coding upstream 118099 9983027 ~ 9983920 (+)
G133281 NA non-coding downstream 117866 10270067 ~ 10270293 (+)
G133285 NA non-coding downstream 125364 10277565 ~ 10277783 (+)
G133286 NA non-coding downstream 127522 10279723 ~ 10279929 (+)
G133303 NA non-coding downstream 146975 10299176 ~ 10299384 (+)
G133310 NA non-coding downstream 154189 10306390 ~ 10306607 (+)
G132667 NA other upstream 532859 9568739 ~ 9569160 (+)
G131077 NA other upstream 1595232 8501408 ~ 8506787 (+)
CI01000026_08297901_08307596 CTRB1 other upstream 1802605 8297857 ~ 8307629 (+)
G130967 NA other upstream 1912946 8188374 ~ 8189073 (+)
G130552 NA other upstream 3005367 7095053 ~ 7096652 (+)
G133192 NA other downstream 7618 10159819 ~ 10161961 (+)
CI01000026_11075931_11078249 MDK, MDKA other downstream 918567 11075784 ~ 11079080 (+)
CI01000026_11241496_11246081 NA other downstream 1092732 11241496 ~ 11246204 (+)
G133542 NA other downstream 1323916 11476117 ~ 11477544 (+)

Expression


Co-expression Network