G133608


Basic Information

Item Value
gene id G133608
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11751165 ~ 11752175 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU151906
TCCGCATACTGCCTTTGCTTCTGGTGGGTGTTGTGTCCATTTGTCTGTCATGTCAACTTCTTCTGTTTGTATATCTCGATCAGTGTTGTCTTCATTGCACTGCACATAAGCCTGGAGACACAAGAATCTCATGGGATTGCATAAAAGCCATTTTGAGTAGGAAAAAAGAAAAACAAATTTAGTTGAGAGAAACAAGAACTGTCCTGAGCTAATTCTTTAATCTTATGCTGCCTATATTGTTCACAACATGGCCAAATACTTCAAAATATCACCATTTTCCTTTTGCAGGCCACATAGCGTGGAAGTACCTACAACTTCCAAAATTTCTAACCTGTTTTGTATCAGCTGTTCCAAAGGTCTTGATGTACATGTCATACTCATTGACAGGAGGCAGGTCCAGCAGAGAGAAGGTGATGGAGAAGTCTAAATCAATCAGACGCAGAAGTTCCTCACTGCGCTTCTTCTGTTTCTTGGCCACTTTCTGGCTGACCTCTCGCTGCTTTGCTGATACAAAATCAATAATTTTGCCATGCGTTTGACTTCTGTTAGAGTGTCTTTCTCTCTGGGTGATAGCTGACTCTATGTTTGTGGGCTTTGATCTTGCAGAGTAGATTCTCTCATTTTCCTCATCAATGGCTCTCTGGATGGCTTCAATCTCTTCTCTTCTCCTGGGGCTCAGCTCCCTCTTCTCTTCTCTCACTTTCTTGTCATCTTCCGCTTTCTCCTCCTCGCCCTTATCATCCTCTTCTTCACCTACATCCTCAAAGTCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151906 True 773 lncRNA 0.43 3 11751165 11752175

Neighbor

gene id symbol gene type direction distance location
CI01000026_11705009_11707949 NA coding upstream 43089 11705009 ~ 11708076 (+)
CI01000026_11698637_11702653 MAF1.L, MAF1 coding upstream 47516 11698637 ~ 11703649 (+)
CI01000026_11497016_11677778 SORCS2 coding upstream 73387 11497016 ~ 11677778 (+)
CI01000026_11483300_11485455 TADA2B coding upstream 265085 11483300 ~ 11486080 (+)
CI01000026_11456632_11473446 TBC1D14 coding upstream 277512 11456632 ~ 11473653 (+)
CI01000026_11756587_11788914 ESYT2B coding downstream 4412 11756587 ~ 11789072 (+)
CI01000026_11792044_11807684 NCAPG2 coding downstream 39869 11792044 ~ 11808274 (+)
CI01000026_11809092_11810238 NA coding downstream 56287 11808462 ~ 11810411 (+)
CI01000026_11862091_11976290 PTPRN2 coding downstream 109916 11862091 ~ 11976290 (+)
CI01000026_12074163_12076475 MNX1 coding downstream 321638 12073813 ~ 12077540 (+)
G133596 NA non-coding upstream 17160 11733745 ~ 11734005 (+)
G133594 NA non-coding upstream 18351 11731811 ~ 11732814 (+)
G133572 NA non-coding upstream 92076 11658530 ~ 11659089 (+)
G133564 NA non-coding upstream 148279 11602202 ~ 11602886 (+)
G133542 NA non-coding upstream 273621 11476117 ~ 11477544 (+)
G134141 NA non-coding downstream 109393 11861568 ~ 11891602 (+)
G134145 NA non-coding downstream 160046 11912221 ~ 11913432 (+)
G134120 NA non-coding downstream 253695 12005870 ~ 12032406 (+)
G134197 NA non-coding downstream 391334 12143509 ~ 12143787 (+)
G134201 NA non-coding downstream 398344 12150519 ~ 12150775 (+)
CI01000026_11241496_11246081 NA other upstream 496092 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 672085 11075784 ~ 11079080 (+)
G133192 NA other upstream 1589204 10159819 ~ 10161961 (+)
G132667 NA other upstream 2182005 9568739 ~ 9569160 (+)

Expression


Co-expression Network