G134141


Basic Information

Item Value
gene id G134141
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 11861568 ~ 11891602 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU152555
TATGTATATATATATATATATATATATATACAGTGGGTACGGAAAGTATTCAGACCCCCTTAAATTTTTCACTCTTTGTTATATTGCAGCCATTTGCTAAAATCATTTAAGTTCATTTTTTTTTCCTCATTAATGTACACACAGCACCCCATATTGACAGAAAAACACAGAATTGTTGACATTTTTGCAGATTTATTACAAAAGAAAAACTGAAATATCACATGGTCCTAAGTGTTCAGACCCTTTGCTCAGTATTTAGTAGAAGCACCCTTTTGATCTAATACAGCCATGAGTCTTTTTGGGAAAGATGTAACAAGTTTTTCACACCTGGATTTGGGGATCCTCTGCCATTCCTCCTTGCAGATCCTCTCCAGTTCTGTCAGGTTGGATGGTAAACGTTGGTGGACAGCCGTTTTTAGGTCTCTCCAGAGATGCTCAATTGGGTTTAAGTCAGGGCTCTGGCTGGGCCATTCAAGAACAGTCACGGAGTTGTTGTGAAGC
>TU152556
TTTTGCAGATTTATTAAAAAAGATATCACATGGTCCTAAGTGTTCAGACCCTTTGCTCAGTATTTAGTAGAAGCACCCTTTTGATCTAATACAGCCATGAGTCTTTTTGGGAAAGATGTAACAAGTTTTTCACACCTGGATTTGGGGATCCTCTGCCATTCCTCCTTGCAGATCCTCTCCAGTTCTGTCAGGTTGGATGGTAAACGTTGGTGGACAGCCGTTTTTAGGTCTCTCCAGAGATGCTCAATTGGGTTTAAGTCAGGGCTCTGGCTGGGCCATTCAAGAACAGTCACGGAGTTGTTGTGAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152555 False 501 lncRNA 0.38 2 11861568 11891602
TU152556 True 309 lncRNA 0.44 2 11861750 11891602

Neighbor

gene id symbol gene type direction distance location
CI01000026_11809092_11810238 NA coding upstream 51157 11808462 ~ 11810411 (+)
CI01000026_11792044_11807684 NCAPG2 coding upstream 53294 11792044 ~ 11808274 (+)
CI01000026_11756587_11788914 ESYT2B coding upstream 72496 11756587 ~ 11789072 (+)
CI01000026_11705009_11707949 NA coding upstream 153492 11705009 ~ 11708076 (+)
CI01000026_11698637_11702653 MAF1.L, MAF1 coding upstream 157919 11698637 ~ 11703649 (+)
CI01000026_12074163_12076475 MNX1 coding downstream 182211 12073813 ~ 12077540 (+)
CI01000026_12094316_12125431 NA coding downstream 202714 12094316 ~ 12126264 (+)
CI01000026_12192269_12200366 NA coding downstream 300050 12191652 ~ 12200734 (+)
CI01000026_12203244_12209526 SHH, SHHA coding downstream 309756 12201358 ~ 12209698 (+)
CI01000026_12425699_12438163 NA coding downstream 532477 12424079 ~ 12438621 (+)
G133608 NA non-coding upstream 109393 11751165 ~ 11752175 (+)
G133596 NA non-coding upstream 127563 11733745 ~ 11734005 (+)
G133594 NA non-coding upstream 128754 11731811 ~ 11732814 (+)
G133572 NA non-coding upstream 202479 11658530 ~ 11659089 (+)
G133564 NA non-coding upstream 258682 11602202 ~ 11602886 (+)
G134145 NA non-coding downstream 20619 11912221 ~ 11913432 (+)
G134120 NA non-coding downstream 114268 12005870 ~ 12032406 (+)
G134197 NA non-coding downstream 251907 12143509 ~ 12143787 (+)
G134201 NA non-coding downstream 258917 12150519 ~ 12150775 (+)
G134215 NA non-coding downstream 303582 12195184 ~ 12195417 (+)
G133542 NA other upstream 384661 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 606495 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 782488 11075784 ~ 11079080 (+)
G133192 NA other upstream 1699607 10159819 ~ 10161961 (+)
G132667 NA other upstream 2292408 9568739 ~ 9569160 (+)

Expression


Co-expression Network