G134325


Basic Information

Item Value
gene id G134325
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 12708966 ~ 12709598 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU152747
CAAGTACCCTTGTAAGTATCCCCCTCCCCCCATAAAAACACTTTCTCATTGGATGCAGATCCCGTAGGTGACCTATTTTGATCTCAAAAAGGTGAGTTCTCACTGAAAGGTGAGGAGTTTGCATCTATGCCATTAACATTCACTCTGAGTTACTCCTGACACTTAGTTGTCTATCATCACAAGTCATTGTCAAGTTCACTGATTATTAAATCTAGTCTCAAAATACAGTGTTGGGGAAAGTTACTTTTAAAAGTAACGCATTACAATATTGCGTTACTGCCCAAAAAAGTAACATTTTATGGAAATTAATCCGTTGTTACCTTTGCGTTACTTTTTCTCATCTGGGCTAGGCTTGCTTGTTTGTTTTATAATAACAAATGGCAAATGTAAAGTCCCTTTCACACCAAAAGTCAAAGGAATAAGTCTCAGACTGAAGGAAATGCAAATTCACGTCTGTACAGTACAGGGCGAGCTCAAACAAACATTACAGCTGTGCTGACTAGGGATGGGCGATACAACTTATTTTGTTTTCGATACGATACCGATACCTTCAAGGCCAATATCGCCGATATCGATACGATACCACTAATATGAACTTATAGATTTTAACATTTATTCAACTATTGAATTACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152747 True 633 lncRNA 0.37 1 12708966 12709598

Neighbor

gene id symbol gene type direction distance location
CI01000026_12706512_12707086 NA coding upstream 1814 12705293 ~ 12707152 (+)
CI01000026_12653232_12657339 CHPF2 coding upstream 51130 12653072 ~ 12657836 (+)
CI01000026_12582462_12589223 GAREM, GAREM1 coding upstream 119409 12582304 ~ 12589557 (+)
CI01000026_12562467_12570436 DPH2 coding upstream 138192 12562467 ~ 12570774 (+)
CI01000026_12558237_12560933 RGS9BP coding upstream 147348 12558237 ~ 12561618 (+)
CI01000026_12867260_12871481 NA coding downstream 157613 12867211 ~ 12871720 (+)
CI01000026_12929788_12932668 HRH3 coding downstream 220041 12929639 ~ 12933391 (+)
CI01000026_12966022_12977066 ORC6 coding downstream 255998 12965596 ~ 12977588 (+)
CI01000026_13019100_13028307 GPT2 coding downstream 308522 13018120 ~ 13029368 (+)
CI01000026_13218786_13290069 PHKB coding downstream 509188 13218786 ~ 13290154 (+)
G134332 NA non-coding upstream 75538 12633109 ~ 12633428 (+)
G134326 NA non-coding upstream 80592 12628018 ~ 12628374 (+)
G134319 NA non-coding upstream 81238 12625829 ~ 12627728 (+)
G134359 NA non-coding upstream 86251 12621919 ~ 12622715 (+)
G134357 NA non-coding upstream 87418 12619441 ~ 12621548 (+)
G134317 NA non-coding downstream 9223 12718821 ~ 12736010 (+)
G134301 NA non-coding downstream 14781 12724379 ~ 12728852 (+)
G134686 NA non-coding downstream 78595 12788193 ~ 12788401 (+)
G134688 NA non-coding downstream 79612 12789210 ~ 12789624 (+)
G134689 NA non-coding downstream 80105 12789703 ~ 12801607 (+)
G133542 NA other upstream 1232059 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 1453893 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 1629886 11075784 ~ 11079080 (+)
G133192 NA other upstream 2547005 10159819 ~ 10161961 (+)
G132667 NA other upstream 3139806 9568739 ~ 9569160 (+)

Expression


Co-expression Network