G134301


Basic Information

Item Value
gene id G134301
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 12724379 ~ 12728852 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU152723
GCACTGTAACTGTAGGTTCTAGAGAAGTGACAATCATTTGTAAAGAAGGTGCCAAACAAAACAAGCACTTGTATATGTGTGAACGTCTTGACCTAAAGCACATCACCTGTCTGTGTTTCTTTGCTTTTGGGAGGCTCCATGCGCTTCACCGGTCCTGTTCTTCGCTCAGGACCTCCACCTCTCCTCGGTCCTGGATTCTGCAGTAGTGGCTGTTTCCCTCTCGCACCTTCTCTGTTCCTGTTTGTCTCCTCATGTCTTCCACCGTCATCTTCTGCACCTCTCTTCTCCTCCCCTCTGATCTGAGCAGGTTCTCTTTCTCTCCAGTTACCCTCAATCCCGTGGTTGAGGGTCGGTCCTTTCCTCCGGGAACTGGGCTGCATGCGGCGGTCTCCACCTCTCCATCCCTTATGGTTCCTCTGCCCAGGCTCTGGATGTTCATAAACTGCTGCAGGCTTTGCTTCTCCTCCAGCAGCCTGATTTTCCTGGTTCTCCTCCCTATCCCTGGGCTGAAGCTCCTTTATTGATCTCTCAGCTCTCACTTTGTTGGGATTCTTCCGTCGGCTGTCTCGATAAGACTTAGTAACGTCTGCTTCCACGGTTGTTTTTTCCTTCTTCTCCTCCTCATCTGTCGATCTGTTAGAAGTGGGTGTGTTGGGATGCTTAGGACCACCAGCTCCACGGCCCCATCCTGAGCAGTCACTATCACTTCCAGGTTTTGTCCATCTTTCACTCTGGAGGTGACGATCATTATTGCGCCTACCATCTACTCGTCCTCCTCTTTGTCTTCCTCCTCTGCCTCTACCTCTTAGGCCTCCTCTGGTGGCAAAATCAGGAGGGGGTAATATATTGTTGGCAGGGTTTTCGAACTCATTTTGACTGTGATCAGTCTCGCTGAACTGCCTAAAGTGATGATGAGGCCTAACATGATGAGCCCTCCAGTCCTGACTGTGGTCCAGCTGCCTGGAACTTCCCCTAGAGTGAGGCTGCTTGGATTTAGCTTGCGGTACAAACTCAGCAGACTCTGGATTCAACTTGGATGCGTCTAAACGTGAAGACAAACGGTTAACAGGCTCTACCTCTGCGTACGCTGGATGACCAGAACCTCGACGAAATTTCATTGCAGGCCATCTGCTGGGACGTCTCTGTAATTGTATTAATTTGATATTGATAAAAGATTTTTTTTTTTAAATGTGCACTCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152723 True 1200 lncRNA 0.50 2 12724379 12728852

Neighbor

gene id symbol gene type direction distance location
CI01000026_12706512_12707086 NA coding upstream 17227 12705293 ~ 12707152 (+)
CI01000026_12653232_12657339 CHPF2 coding upstream 66543 12653072 ~ 12657836 (+)
CI01000026_12582462_12589223 GAREM, GAREM1 coding upstream 134822 12582304 ~ 12589557 (+)
CI01000026_12562467_12570436 DPH2 coding upstream 153605 12562467 ~ 12570774 (+)
CI01000026_12558237_12560933 RGS9BP coding upstream 162761 12558237 ~ 12561618 (+)
CI01000026_12867260_12871481 NA coding downstream 138359 12867211 ~ 12871720 (+)
CI01000026_12929788_12932668 HRH3 coding downstream 200787 12929639 ~ 12933391 (+)
CI01000026_12966022_12977066 ORC6 coding downstream 236744 12965596 ~ 12977588 (+)
CI01000026_13019100_13028307 GPT2 coding downstream 289268 13018120 ~ 13029368 (+)
CI01000026_13218786_13290069 PHKB coding downstream 489934 13218786 ~ 13290154 (+)
G134325 NA non-coding upstream 14781 12708966 ~ 12709598 (+)
G134332 NA non-coding upstream 90951 12633109 ~ 12633428 (+)
G134326 NA non-coding upstream 96005 12628018 ~ 12628374 (+)
G134319 NA non-coding upstream 96651 12625829 ~ 12627728 (+)
G134359 NA non-coding upstream 101664 12621919 ~ 12622715 (+)
G134686 NA non-coding downstream 59341 12788193 ~ 12788401 (+)
G134688 NA non-coding downstream 60358 12789210 ~ 12789624 (+)
G134689 NA non-coding downstream 60851 12789703 ~ 12801607 (+)
G134691 NA non-coding downstream 74967 12803819 ~ 12810713 (+)
G134699 NA non-coding downstream 120435 12849287 ~ 12849780 (+)
G133542 NA other upstream 1247472 11476117 ~ 11477544 (+)
CI01000026_11241496_11246081 NA other upstream 1469306 11241496 ~ 11246204 (+)
CI01000026_11075931_11078249 MDK, MDKA other upstream 1645299 11075784 ~ 11079080 (+)
G133192 NA other upstream 2562418 10159819 ~ 10161961 (+)
G132667 NA other upstream 3155219 9568739 ~ 9569160 (+)

Expression


Co-expression Network