CI01000028_00590268_00592921


Basic Information

Item Value
gene id CI01000028_00590268_00592921
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 589938 ~ 593521 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_00590268_00592921.mRNA
ATATTTAAACACAGCATGAGTGTAGGTAAAGTCAAACCGTTCAACACAATATTCACATTTGCTATTATGTATGCAAGCTGCAAGCAAACTGTATGAAAGATTCACAATCTCACACTCATTTCCCTCTCCTTGAAACCAAGCTGGCTTTATAATCTTCCCCTCCTTTATCGAGCAGCCCCCGCTTGTTCCCTGCTTTTCTACTGAGTTATCAGGAGACTCTAAGTGTGACAGGACCAGAGAGGCTAGACGGAGGAAAATCTCTCAGTTTGTAGTCGCAGCCCCAGGCGAGAGGACTAATACCCCTGTAACGAAGAATCAGAGAGAATCGATATGACTCCCGGCGACAGGGATTTCACTAGGTGCTTCTCTCTGAAAGTGTGCACCCGATACAATTCGATCGCCGTAACACATTCGCACGTGAACGCACACGCAAACGCACACGTGCATGCACTCACATGCAAGTTCTCCTGCAATGCAACTGGCAGGCTTGCGAAACTCCTGCAATGCACTAAAACACGTGCTCACTCTCTAACATCGGGAAGGCTGACTTACCTTCATTCGAGCGCAGAGGTAGCTGTGCAGTGTCAGGGGAAGCATGTTAGGGCAGCTGCGCTCTGTTCTTCTGACTCCAGCTCTGATGTGCTCATCTCAACTGCCTCACCGACTCGGTACACACACCACCTCCTTACCTCGCTCTCCTGGAGGATGCGAGCGAGCGAGAGAAAGAGAGGGAGGGATGTGAAACTTAAGAACAGCCTGGGGGTGAGATACACCACAGTGCTGTATGTACAGAAGCGGAGAAGAGGCGCAGGGGGACTGATTGAGAGTGTGTTGCGAGAGATAAAGTTGGACATTTACTCTGCAAGGTCATCGGAATGCGGAACGAATATACAATGTGCACCGATTGACATGACGGAGTGCCAGTATAAAGGAGCCTGTGATGTGATGTGAAGGAACATTTGTAATGTCCCTTGTGAAAAAGAATACACTTTAAAATGAGTATGTGTTATGGAAATAATATACTTTAAAAGAATATACTTAATTGCAAACTGAATGTCATGTTTTTGGACACAGTGTTTTTTTTTTTTTAATATATACTTTTAAGACACTTTGATGTAATGCTTAAAATGCTTGCTTTGAACTGCCTTGTGTTGTTAAAGTGTCAATTTGAGTTGTACGCTTTTACAAGCAAGCAAGCAAACAAACAATAAATAAATAAATAAAATAAATTAATGGTAAAAAGTAGGTTGCATACATTCAGAGGATCCTGTGCCATTCGAACAGCTGCCTTTGAGATGAATGGGAATGCTAATGGAGAGTTAGGCCTCCTAGTGCTGTTTGGGATACTCAAACTAATTTGATAGCGCCATAGTCGTAATGATTACACTTATAGTTGTATTTGCATATTTAGCAGGTATTAAGCTGTTAAGTATGCTGTTGAGATACCAAGTCCTTAAGTAAGCACACTTGCAGTGTATTGTCTCAGTCTTCTAAACTCAAAAGTTTTCTGTTTTGATCAGTAGTTATGCTTTGAGAACAAACTGTGAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_00590268_00592921.mRNA True 1551 mRNA 0.43 4 589938 593521

Neighbor

gene id symbol gene type direction distance location
CI01000028_00525538_00533862 NA coding upstream 55769 524647 ~ 535245 (+)
CI01000028_00480248_00480873 NA coding upstream 108282 480248 ~ 481656 (+)
CI01000028_00408392_00408646 NA coding upstream 181153 408256 ~ 408785 (+)
CI01000028_00322030_00328679 ESRRD coding upstream 261221 322030 ~ 328717 (+)
CI01000028_00291055_00310156 NA coding upstream 279782 291055 ~ 310156 (+)
CI01000028_00612606_00613724 KCNJ1A.3, KCNJ1A.1 coding downstream 16479 610000 ~ 614343 (+)
CI01000028_00657528_00691252 NA coding downstream 63965 657486 ~ 692081 (+)
CI01000028_00710081_00723407 ETS1 coding downstream 116560 710081 ~ 723746 (+)
CI01000028_00748991_00751030 NA coding downstream 155090 748611 ~ 751269 (+)
CI01000028_00825706_00832424 NA coding downstream 232109 825630 ~ 832458 (+)
G144611 NA non-coding upstream 31862 557673 ~ 558076 (+)
G144599 NA non-coding upstream 116664 473002 ~ 473274 (+)
G144598 NA non-coding upstream 117598 472104 ~ 472340 (+)
G144592 NA non-coding upstream 122066 467672 ~ 467872 (+)
G144641 NA non-coding downstream 30950 624471 ~ 626011 (+)
G144668 NA non-coding downstream 136912 730433 ~ 730792 (+)
G144669 NA non-coding downstream 137370 730891 ~ 731254 (+)
G144673 NA non-coding downstream 206648 800169 ~ 809707 (+)
G144707 NA non-coding downstream 217574 811095 ~ 811321 (+)
G145843 NA other downstream 2429625 3023146 ~ 3024220 (+)
G147462 NA other downstream 4365182 4958703 ~ 4989838 (+)
G147636 NA other downstream 4622569 5216090 ~ 5216611 (+)
G147693 NA other downstream 4846933 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 6876371 7469543 ~ 7471432 (+)

Expression


Co-expression Network