CI01000028_03689833_03704593 (TREH)


Basic Information

Item Value
gene id CI01000028_03689833_03704593
gene name TREH
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 3689521 ~ 3704739 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000028_03689833_03704593.mRNA
TTATAAATGTCAGCTTCCAATACTGCTTTATCTCACTAGATGTCAGTATTTTGAGTTATGATTTCATTTCTTCCCTAAATTCATCTTATGTAACATTTTCATTCTGCCCCTAGTAACAATCTGCATACTGATATCTGACAGCGAAGTATAGGCTAGGTGTGTTATGCTCTGAAAATGATTCATCAGTGCAGTATGATTTTAAACTGACCTCTAACCCCTTAATCATTGATAAACAGCTCAGAGCTTTAAAAGTCAGGCTACAGTTTACTGACTGTTCGTTACTACGGACTATCGATAATTTAGCTCCCCAAGATGCACTGCTTAATTGTGACAATCTTTTCATCCGTCCTTTTCTGTTCCGGAAACATGCTTCTGGCACCTTGTGACAGCCCAATCTACTGCACAGGAGAAGTCCTGCGACAGGTCCAGATGGCTAAACTGTTTGATGATGATAAGTACTTTGTAGATATGAAGTTGACTACAGCTCCTGAGGTCGTTGTGGAGGCTTTTGCAAATCTGACCTCAGGGTTCCCAAACAAGACCGTCCCATCCTCAGAGCTACAGAAGTTCCTGCAAACATACTTTGAAGAGCCGGGTAAGGAGTTTGAGCAGTGGAACCCCCCAGACTGGCATTCAAAGCCAAAATTCTTATCCAGGGTGTCTGACTCTAAATATCGCAGTTGGGCTGAAGAACTGCATGGTTTGTGGAAGTCTCTTGGTCGAAAGATCCGTGATGATGTCAGAGACCACCCAGAGCTGTACTCGCAGATTTACACCCCATACCCAGTCGTCGTGCCTGGTGGCCGCTTTAGAGAACTCTATTACTGGGACTCTTATTGGGTAATAAACGGCCTCCTTTTGTCTGAGATGACCGAGACAGCTCGAGGAATGATTCTGAACTTCATGTTCCTTGTGGAAAGATACGGCTTTGTCCCAAACGGTGGTCGAGTTTATTACGAGCGGCGCAGTCAGCCTCCCTTCCTTCCCCTAATGGTGGAAAGCTTCTATGAGGTCACCAGAGACAAAGATTTCCTCGGGCAGGTTTTGCCAGCGCTGGAAAGAGAGTACAGCTTTTGGATGCAGAATCGCTCTCATGTTGTGGCGATAAATGGACTGACTCACATCCTGAATCGATATAATGTACCGGTGGACAGGCCCAGGCCTGAGTCCTACAGTGATGATGTCGAACTGGCTGAGGGTCTGTCAACAGAGGCTCAGAAGAGACTTTGGGTGGAATTGACATCTGGGGCAGAGTCCGGCTGGGATTTCTCTTCTCGCTGGTATATAGACATCACAGGCAGAAACAACGGCACCCTGAGCGACACACAGACAAGCTCCATCCTGCCTGCTGACCTCAATGCCATTATGTGCCGCAATGAGCGTCTGCTGGCCTCCTTCCACAGGATTCTGGGTAATGAAGAGAAGGCAGCGGAATATGACAAGGCACTTTCTGCTAGAATTATAGCGGTTGAAAGCCTGCTGTGGGATGCAGAGAGAGGAGCCTGGTTTGATTTCAGCCTGGTGAACGAGACCCGGCACCTGTCCTTCTACCCATCTAACCTGGCACCTCTCTGGGCACGCTGTTACTCTAAGCTGGAGATGGGCGATCAGGCCGTGCAGTACCTGAGAGCTAGTGGAGGTCTGGACTATCCTAATGGGGTTCCCACCTCTCTTAGTGAAAGTGGGCAGCAGTGGGACATGCCCAACGCCTGGCCTCCGCTTCAACACATGATTATAGAAGGTCTCTCCGGGCTCGATTCAGCCCACGCTAAAGAGATCGCCTTCAGTTTGGCCCAACGGTGGATACAGACCAACTGGCGGGCGTACATCAAATATGAGGCCATGTTTGAGAAGTACGATGTCAACGGTGATGGAAAGCCCGGAGGAGGTGGCGAGTATGAAGTTCAGGTATTAATGGTCTGTTCATATTTACATATTCAAATTCATAAATCTGCTTCCGAGCCGGGCACAGCGCTATGGAGACATTTTAATCTCTGGAGGAATTAGGGGTAAATTAGAGTTCTTCAGACCAGCAGAACCATTCTTGAAATGTAGAATCTCATTTCCTCCCAGACCCTGAGGACCAATAGAGTGTCTAGAGAAGAAACGGCAAATTAATAGAAACTCAGATCATCAAATTCCAAGTTCATAGA

Function

symbol description
treh Predicted to enable alpha,alpha-trehalase activity. Predicted to act upstream of or within trehalose metabolic process. Orthologous to human TREH (trehalase).

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K01194 TREH, treA, treF; alpha,alpha-trehalase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000028_03689833_03704593.mRNA True 2153 mRNA 0.47 14 3689521 3704739

Neighbor

gene id symbol gene type direction distance location
CI01000028_03677140_03686568 DDX6 coding upstream 2545 3674444 ~ 3686976 (+)
CI01000028_03650532_03667920 BCL9L coding upstream 21510 3648405 ~ 3668011 (+)
CI01000028_03543288_03567292 CDON coding upstream 121855 3542153 ~ 3567666 (+)
CI01000028_03522456_03524618 NA coding upstream 164314 3521969 ~ 3525207 (+)
CI01000028_03426799_03428872 NA coding upstream 259371 3424865 ~ 3430150 (+)
CI01000028_03946366_03958585 NA coding downstream 239782 3944521 ~ 3959823 (+)
CI01000028_04145294_04156879 NA coding downstream 440204 4144943 ~ 4158653 (+)
CI01000028_04216684_04219734 NA coding downstream 510647 4215386 ~ 4219777 (+)
CI01000028_04224432_04233899 NA coding downstream 519487 4224226 ~ 4234212 (+)
CI01000028_04240962_04247433 NA coding downstream 535383 4240122 ~ 4248422 (+)
G146652 NA non-coding upstream 205805 3483447 ~ 3483716 (+)
G146651 NA non-coding upstream 206128 3483168 ~ 3483393 (+)
G146635 NA non-coding upstream 207032 3466595 ~ 3482489 (+)
G146627 NA non-coding upstream 253406 3435822 ~ 3436115 (+)
G146617 NA non-coding upstream 265036 3424273 ~ 3424485 (+)
G146765 NA non-coding downstream 122745 3827484 ~ 3828821 (+)
G146767 NA non-coding downstream 127952 3832691 ~ 3832915 (+)
G146770 NA non-coding downstream 136094 3840833 ~ 3841036 (+)
G146788 NA non-coding downstream 224489 3929228 ~ 3935653 (+)
G145843 NA other upstream 665301 3023146 ~ 3024220 (+)
CI01000028_00525538_00533862 NA other upstream 3167590 524647 ~ 535245 (+)
G147462 NA other downstream 1253964 4958703 ~ 4989838 (+)
G147636 NA other downstream 1511351 5216090 ~ 5216611 (+)
G147693 NA other downstream 1735715 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 3765153 7469543 ~ 7471432 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other downstream 4597508 8302247 ~ 8504940 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location