Gene
RNA
| Item | Value |
|---|---|
| gene id | G146765 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000028 |
| NCBI id | null |
| chromosome length | 9874160 |
| location | 3827484 ~ 3828821 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU166743 | False | 1239 | lncRNA | 0.37 | 1 | 3827484 | 3828722 |
| TU166744 | False | 1174 | lncRNA | 0.37 | 1 | 3827549 | 3828722 |
| TU166745 | False | 556 | lncRNA | 0.37 | 1 | 3828167 | 3828722 |
| TU166746 | True | 655 | lncRNA | 0.38 | 1 | 3828167 | 3828821 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000028_03689833_03704593 | TREH | coding | upstream | 122745 | 3689521 ~ 3704739 (+) |
| CI01000028_03677140_03686568 | DDX6 | coding | upstream | 140508 | 3674444 ~ 3686976 (+) |
| CI01000028_03650532_03667920 | BCL9L | coding | upstream | 159473 | 3648405 ~ 3668011 (+) |
| CI01000028_03543288_03567292 | CDON | coding | upstream | 259818 | 3542153 ~ 3567666 (+) |
| CI01000028_03522456_03524618 | NA | coding | upstream | 302277 | 3521969 ~ 3525207 (+) |
| CI01000028_03946366_03958585 | NA | coding | downstream | 115700 | 3944521 ~ 3959823 (+) |
| CI01000028_04145294_04156879 | NA | coding | downstream | 316122 | 4144943 ~ 4158653 (+) |
| CI01000028_04216684_04219734 | NA | coding | downstream | 386565 | 4215386 ~ 4219777 (+) |
| CI01000028_04224432_04233899 | NA | coding | downstream | 395405 | 4224226 ~ 4234212 (+) |
| CI01000028_04240962_04247433 | NA | coding | downstream | 411301 | 4240122 ~ 4248422 (+) |
| G146652 | NA | non-coding | upstream | 343768 | 3483447 ~ 3483716 (+) |
| G146651 | NA | non-coding | upstream | 344091 | 3483168 ~ 3483393 (+) |
| G146635 | NA | non-coding | upstream | 344995 | 3466595 ~ 3482489 (+) |
| G146627 | NA | non-coding | upstream | 391369 | 3435822 ~ 3436115 (+) |
| G146617 | NA | non-coding | upstream | 402999 | 3424273 ~ 3424485 (+) |
| G146767 | NA | non-coding | downstream | 3870 | 3832691 ~ 3832915 (+) |
| G146770 | NA | non-coding | downstream | 12012 | 3840833 ~ 3841036 (+) |
| G146788 | NA | non-coding | downstream | 100407 | 3929228 ~ 3935653 (+) |
| G146796 | NA | non-coding | downstream | 119041 | 3947862 ~ 3948094 (+) |
| G145843 | NA | other | upstream | 803264 | 3023146 ~ 3024220 (+) |
| CI01000028_00525538_00533862 | NA | other | upstream | 3305553 | 524647 ~ 535245 (+) |
| G147462 | NA | other | downstream | 1129882 | 4958703 ~ 4989838 (+) |
| G147636 | NA | other | downstream | 1387269 | 5216090 ~ 5216611 (+) |
| G147693 | NA | other | downstream | 1611633 | 5440454 ~ 5453610 (+) |
| CI01000028_07470324_07471346 | NA | other | downstream | 3641071 | 7469543 ~ 7471432 (+) |
| CI01000028_08302370_08504940 | SPON1, SPON1A | other | downstream | 4473426 | 8302247 ~ 8504940 (+) |
