G146788


Basic Information

Item Value
gene id G146788
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 3929228 ~ 3935653 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU166769
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGCGAGAGGGAGAGAGAGAGGGCCAGAGAGAGTGCCCAAGAAAAGCCAAGAATCAAAGAGACAGAGCAACAGTTACAATCTTCTTTTATCCCTTCCTTGACCATGTGACTGAAACCAAAATATGAGACATTCAAACTGACCAATCAGGAAATTAAAACTTCCCCCACTGTACTAAAGGTGTGACCATTTGTAGACCCCCGATGTATATACATTTTGGCCTACAGGCCTTGATCACCTTCAACACCTTTGTGCCTTCCAAATGGCCCTTGTAGCAAGAGAGAGGGGGTTGAAACAGTAAAGCAAATGTCTTTGTTCGTTTTAAAATATCTTAAGATATTTTCAGTCTTAC
>TU166770
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGCCAGAGAGAGTGCCCAAGAAAAGCCAAGAATCAAAGAGACAGAGCAACAGTTACAATCTTCTTTTATCCCTTCCTTGACCATGTGACTGAAACCAAAATATGAGACATTCAAACTGACCAATCAGGAAATTAAAACTTCCCCCACTGTACTAAAGGTGTGACCATTTGTAGACCCCCGATGTATATACATTTTGGCCTACAGGCCTTGATCACCTTCAACACCTTTGTGCCTTCCAAATGGCCCTTGTAGCAAGAGAGAGGGGGTTGAAACAGTAAAGCAAATGTCTTTGTTCGTTTTAAAATATCTTAAGATATTTTCAGTCTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166769 False 393 lncRNA 0.42 2 3929228 3935653
TU166770 True 391 lncRNA 0.42 2 3929228 3935653

Neighbor

gene id symbol gene type direction distance location
CI01000028_03689833_03704593 TREH coding upstream 224489 3689521 ~ 3704739 (+)
CI01000028_03677140_03686568 DDX6 coding upstream 242252 3674444 ~ 3686976 (+)
CI01000028_03650532_03667920 BCL9L coding upstream 261217 3648405 ~ 3668011 (+)
CI01000028_03543288_03567292 CDON coding upstream 361562 3542153 ~ 3567666 (+)
CI01000028_03522456_03524618 NA coding upstream 404021 3521969 ~ 3525207 (+)
CI01000028_03946366_03958585 NA coding downstream 8868 3944521 ~ 3959823 (+)
CI01000028_04145294_04156879 NA coding downstream 209290 4144943 ~ 4158653 (+)
CI01000028_04216684_04219734 NA coding downstream 279733 4215386 ~ 4219777 (+)
CI01000028_04224432_04233899 NA coding downstream 288573 4224226 ~ 4234212 (+)
CI01000028_04240962_04247433 NA coding downstream 304469 4240122 ~ 4248422 (+)
G146770 NA non-coding upstream 88192 3840833 ~ 3841036 (+)
G146767 NA non-coding upstream 96313 3832691 ~ 3832915 (+)
G146765 NA non-coding upstream 100407 3827484 ~ 3828821 (+)
G146652 NA non-coding upstream 445512 3483447 ~ 3483716 (+)
G146651 NA non-coding upstream 445835 3483168 ~ 3483393 (+)
G146796 NA non-coding downstream 12209 3947862 ~ 3948094 (+)
G146804 NA non-coding downstream 35703 3971356 ~ 3971773 (+)
G146807 NA non-coding downstream 51961 3987614 ~ 3989177 (+)
G146809 NA non-coding downstream 58401 3994054 ~ 3994280 (+)
G145843 NA other upstream 905008 3023146 ~ 3024220 (+)
CI01000028_00525538_00533862 NA other upstream 3407297 524647 ~ 535245 (+)
G147462 NA other downstream 1023050 4958703 ~ 4989838 (+)
G147636 NA other downstream 1280437 5216090 ~ 5216611 (+)
G147693 NA other downstream 1504801 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 3534239 7469543 ~ 7471432 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other downstream 4366594 8302247 ~ 8504940 (+)

Expression


Co-expression Network