G146804


Basic Information

Item Value
gene id G146804
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 3971356 ~ 3971773 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU166788
CACATCCTTCTAGTAGAGAATCTGGCACAGTCATCGCAGTCAGCATTGGACTGGTGAACTCATGAAAGCACACAGGTGACGACAGGATTCAGGTCTCATAAGAAAATTGGAACAAAATAATAACTATATTAACTAGTCACCGGCATTTAAAAAAAATAAAAAATAAAAAAATGTTATACTCAGCAACAACTGAAATGGATTTTGTTCCCTTTTCCATGTAGGTTTAAAAAAAAAAAAAAAAAAAAGTTGCGGGTTCGAGTCTGGGTGTGTGTGTCCACGGTTTGCAGTGTGTGTGTGTTCACTACCCTCTGCTCCTAATGTGTGTGCACCAAGCGTGCCACTCCAGTCCTGAAAAGTGAAGCCAAAATGTCTCGATCGCCCCCAGGTGGCTGGAAGCAGTATAGGTCATAAACCCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166788 True 418 lncRNA 0.42 1 3971356 3971773

Neighbor

gene id symbol gene type direction distance location
CI01000028_03946366_03958585 NA coding upstream 11533 3944521 ~ 3959823 (+)
CI01000028_03689833_03704593 TREH coding upstream 266617 3689521 ~ 3704739 (+)
CI01000028_03677140_03686568 DDX6 coding upstream 284380 3674444 ~ 3686976 (+)
CI01000028_03650532_03667920 BCL9L coding upstream 303345 3648405 ~ 3668011 (+)
CI01000028_03543288_03567292 CDON coding upstream 403690 3542153 ~ 3567666 (+)
CI01000028_04145294_04156879 NA coding downstream 173170 4144943 ~ 4158653 (+)
CI01000028_04216684_04219734 NA coding downstream 243613 4215386 ~ 4219777 (+)
CI01000028_04224432_04233899 NA coding downstream 252453 4224226 ~ 4234212 (+)
CI01000028_04240962_04247433 NA coding downstream 268349 4240122 ~ 4248422 (+)
CI01000028_04441930_04444388 TTC36 coding downstream 470093 4441866 ~ 4444480 (+)
G146796 NA non-coding upstream 23262 3947862 ~ 3948094 (+)
G146788 NA non-coding upstream 35703 3929228 ~ 3935653 (+)
G146770 NA non-coding upstream 130320 3840833 ~ 3841036 (+)
G146767 NA non-coding upstream 138441 3832691 ~ 3832915 (+)
G146807 NA non-coding downstream 15841 3987614 ~ 3989177 (+)
G146809 NA non-coding downstream 22281 3994054 ~ 3994280 (+)
G146815 NA non-coding downstream 37880 4009653 ~ 4009886 (+)
G146819 NA non-coding downstream 51218 4022991 ~ 4023241 (+)
G146830 NA non-coding downstream 77606 4049379 ~ 4049578 (+)
G145843 NA other upstream 947136 3023146 ~ 3024220 (+)
CI01000028_00525538_00533862 NA other upstream 3449425 524647 ~ 535245 (+)
G147462 NA other downstream 986930 4958703 ~ 4989838 (+)
G147636 NA other downstream 1244317 5216090 ~ 5216611 (+)
G147693 NA other downstream 1468681 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 3498119 7469543 ~ 7471432 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other downstream 4330474 8302247 ~ 8504940 (+)

Expression


Co-expression Network