G146854


Basic Information

Item Value
gene id G146854
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 4099900 ~ 4100242 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU166845
TCTCTGAGGCATGGTAAAGCATGGTACTCGCAAATAATCAAGAAAATTAGATTTAAACAATAAGACTAACTTTAAACGTGTTAAGCAATATAACAATAATTAGTTTTCTGTCTATAAATATATTGAAACAGTTGTTCCCTTCCCTATTAAAGCGTATATATTAAAGCGTCTTTGGTGTTTCCATGGTTTCTACAAAATAAAACTGGAAACCGAGGGTAACGCGGGTATGACGCAATTGACAGGCGACTCCTCACACGTCCTGGAGCCTTGGTTAAAATTGCAATTTTCTCACGATTTACAAATAGTTGCAAACATTTGGGATATTGTAAGTACTCAATGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166845 True 343 lncRNA 0.35 1 4099900 4100242

Neighbor

gene id symbol gene type direction distance location
CI01000028_03946366_03958585 NA coding upstream 140077 3944521 ~ 3959823 (+)
CI01000028_03689833_03704593 TREH coding upstream 395161 3689521 ~ 3704739 (+)
CI01000028_03677140_03686568 DDX6 coding upstream 412924 3674444 ~ 3686976 (+)
CI01000028_03650532_03667920 BCL9L coding upstream 431889 3648405 ~ 3668011 (+)
CI01000028_03543288_03567292 CDON coding upstream 532234 3542153 ~ 3567666 (+)
CI01000028_04145294_04156879 NA coding downstream 44701 4144943 ~ 4158653 (+)
CI01000028_04216684_04219734 NA coding downstream 115144 4215386 ~ 4219777 (+)
CI01000028_04224432_04233899 NA coding downstream 123984 4224226 ~ 4234212 (+)
CI01000028_04240962_04247433 NA coding downstream 139880 4240122 ~ 4248422 (+)
CI01000028_04441930_04444388 TTC36 coding downstream 341624 4441866 ~ 4444480 (+)
G146830 NA non-coding upstream 50322 4049379 ~ 4049578 (+)
G146819 NA non-coding upstream 76659 4022991 ~ 4023241 (+)
G146815 NA non-coding upstream 90014 4009653 ~ 4009886 (+)
G146809 NA non-coding upstream 105620 3994054 ~ 3994280 (+)
G146807 NA non-coding upstream 110723 3987614 ~ 3989177 (+)
G146860 NA non-coding downstream 20215 4120457 ~ 4120726 (+)
G146862 NA non-coding downstream 23310 4123552 ~ 4123775 (+)
G146863 NA non-coding downstream 23697 4123939 ~ 4124192 (+)
G146864 NA non-coding downstream 25760 4126002 ~ 4126333 (+)
G145843 NA other upstream 1075680 3023146 ~ 3024220 (+)
CI01000028_00525538_00533862 NA other upstream 3577969 524647 ~ 535245 (+)
G147462 NA other downstream 858461 4958703 ~ 4989838 (+)
G147636 NA other downstream 1115848 5216090 ~ 5216611 (+)
G147693 NA other downstream 1340212 5440454 ~ 5453610 (+)
CI01000028_07470324_07471346 NA other downstream 3369650 7469543 ~ 7471432 (+)
CI01000028_08302370_08504940 SPON1, SPON1A other downstream 4202005 8302247 ~ 8504940 (+)

Expression


Co-expression Network