G150943



Basic Information


Item Value
gene id G150943
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000028
NCBI id null
chromosome length 9874160
location 9313848 ~ 9314658 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU171410
GTTGCACATATGCACATCTCCCGCTGACTGGGATTTATAAAGTGATTTTTGCATAGGTTCTGGTGTATGCATGGTTTTATAAATCTGAAAACTTTTGTGCGTACATATACTTTTAAGGTCTCTTAACTTTCCCTCTCTTGGCAGAGAGTAAAGGGAGTGCAGTTTAGACATGAGTTCTATAAAAAAGAATACTATGCATTTTACACAGATTTCTTTCAAGTCATCTTTTAAATTATGAGCAGACAAACATACTTACAGGAAACAAGAAACACTTTCAGTCAACCATTCAGTAGTTATAATGATTGCATAAATTATGATCTAAACATAATAGTCACACATATTTAGGTTGTAGACATGATATAGAATTATGCAGTTGAACCATGTTTGAATTATAAGTCCGTCAACCATCCTTTTTTGAATTATTTGATGCAGTTTATATATAAAAACAGTGGGTCTCATTCACTAAGCATGCGTACGCACAAATTTGTGCATGAAATGTGCATAGGAACGATTTTAAGAACAAATCACGATTCACCAAAAATTTCGTACTAAAAATCATTCTAAATTTACGACAAAATATAGGAACAACTGAAAGCACTCGTTTGCAAAAAAGTACTTACTCTGTACAGCCTTATAATCGTGTTAAGAAGTTATATAAATATGAAATTTAATCCTAACAACACTATAATTATATTAAAGTATGTTACATTAGTTGTATTATATAATTCATATGTAAAATTATATAATAAAAGTATAAAATAATACAGTTTAATCTTAAATACATATACTATACAGTGATTATGTTCAGCTG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU171410 True 811 lncRNA 0.30 1 9313848 9314658

Neighbor


gene id symbol gene type direction distance location
CI01000028_09224491_09231508 NA coding downstream 82003 9223805 ~ 9231845 (-)
CI01000028_09159785_09161996 NA coding downstream 151032 9159749 ~ 9162816 (-)
CI01000028_09097962_09100854 NA coding downstream 212994 9097962 ~ 9100854 (-)
CI01000028_09035121_09057360 NA coding downstream 255883 9034579 ~ 9057965 (-)
CI01000028_09019298_09021471 NA coding downstream 290758 9017345 ~ 9023090 (-)
CI01000028_09326092_09330464 NA coding upstream 11189 9325847 ~ 9330507 (-)
CI01000028_09331581_09331760 NA coding upstream 16681 9331339 ~ 9331886 (-)
CI01000028_09340262_09347554 NA coding upstream 25291 9339949 ~ 9347720 (-)
CI01000028_09449656_09453949 NA coding upstream 134445 9449103 ~ 9453949 (-)
CI01000028_09463027_09468717 NA coding upstream 147716 9462374 ~ 9468717 (-)
G150938 NA non-coding downstream 6007 9307501 ~ 9307841 (-)
G150937 NA non-coding downstream 9294 9304329 ~ 9304554 (-)
G150894 NA non-coding downstream 14132 9242138 ~ 9299716 (-)
G150926 NA non-coding downstream 23257 9288983 ~ 9290591 (-)
G150886 NA non-coding downstream 78801 9234838 ~ 9235047 (-)
G150953 NA non-coding upstream 19109 9333767 ~ 9333977 (-)
G151087 NA non-coding upstream 36415 9351073 ~ 9351358 (-)
G151089 NA non-coding upstream 38267 9352925 ~ 9353374 (-)
G151090 NA non-coding upstream 39242 9353900 ~ 9354181 (-)
G150328 NA other downstream 620105 8693398 ~ 8693743 (-)
G149923 NA other downstream 1289604 7974568 ~ 8024244 (-)
CI01000028_07527725_07535631 ARPP19 other downstream 1778105 7525962 ~ 7535743 (-)
G149474 NA other downstream 2081065 7229791 ~ 7232783 (-)
CI01000028_06969947_06983352 NA other downstream 2341951 6965064 ~ 6984084 (-)
CI01000028_09469357_09494746 NA other upstream 162187 9469343 ~ 9494746 (-)

Expression



Co-expression Network