CI01000029_07500425_07501888


Basic Information

Item Value
gene id CI01000029_07500425_07501888
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7500325 ~ 7502032 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_07500425_07501888.mRNA
TTATAAATGCGGCACGGCACACCTCGTACTCATGAATGTGAAGTACGCTGGTCACTTCGCCATAACTTCGTGAATATCGTTACATAACGTGTCAGCAGAGATGAGAGAGATCCTAGGAATGGCGCTGGCGCTCGTTGTTCTGAGAGTTAACGGGGAAAACATCGATGAAGGTTTTTGTGTGGAGGGAAAATGCTTTTCCGTCCAAACAGACAGTGCGACTTTTGATGAGGCGCAGAAAGTCTGTCGGGAAAAAAGAGGGCATCTGATGACCGTACGCACCCAAAAATCGGCTGATGTTCTTACTAAGTTGCTGAAGGGAACTTCTGGAGACTTTTGGCTTGGGCTGAGATATCAGTGCTCAAACGACGGGTTAAAGGGATACAAATGGGTCACTGGAGATGATACGAGCCTCTACGTAAACTGGGAAAGCGACCGAGCGATTTGTTCTCCACAATGTGCATCGGTATCACAAAAAGTTCAGAAGTTGGCCGAAAGACCTTGCGATGATAGAATCGAGGGATATTTGTGTGAATATGACAATGCCGATTACTGTCAGCCGCTGAGCAACGAAGCAGACGTATTATATGAAATTCCTTTGGGATTTAAGGCAAACGAACTCCAAGAAATCCCCAAAGGCACCAATGCGACATTGCCGCCGCTGAGAACGAGACACATTTGTTTCGACGGCGTTTGGATTCAGGCGCCTTGGAGTTGTGAGGTTTTTGGTGGTGGATGTGATTATAAGTGTGGTTCGAACGGGAAAAACTTCGAATGCAGCTGTCAGCCGGGATTTAAACTCGACAGCAACCGAGTCACATGCAGCAAGGAGGAACCTGAGCTGGCATTTAAAGTTGTAAAGCCTTTCGAAGACTGCAAGCCCGGCTATAGCAATGAAAATGGGGTTTGTGTTGATGAGGACGAATGCGTGTCTGCACCATGCGAGCACGAATGTAATAACATTGAAGGTGGTTATGAATGTGAATGCTATGAGGGATTCATAAAGTCGACGGAGGACATGAGCAAATGTAAGATGCAGTGTACGGAATTCCAGTGCCCAGCTGAATGTGACCCCAACAACGACGATCAGTGCAACTGCCCCGATGGTTTCTTACTTGAAGAAAAAGAAAGAGAAAAAATATGCGTTGACCATGATGAATGCGATAGTGGTTACTGTGACCAGGAATGTGTAAATACACCTGGAGATTATGTATGTTCCTGCAGAGAAGGATTCAAGCTTTTGAACAAGAGTAATTGTGTGAGAGAAGACTTTGAGGGCTCAGGAAGCTCAACACCTTTTGACATTTTTACACCTACAAGCAGACCCCCAACCAAGAAGCCAATATCAATCTCAACGGCCAGTCTTTTAGCAATAATGGTTGCCATTGTTGTTTGTATTCTTGTATTGGTCTGCCTCGCTCACTGCATATTGAGACGTTATTGTCAAATGCACAATTACGATGTGCACAAAAGCCACGAAAATATCTACGACTTTCAACAGGTGATCATTGAAAAAAATTGCACTGAACAGTCATTCCCAAATCGGTATTTAAAAAGAGACACTTAAAGACAGACATCACGCAAACTGAAATGTAAATAGTAGTACATTTATTTGACTTTAGATGTAAACAAATATACAGTGTCAGAAACTTTGCACAAGTTTGAATAAGTCAACAATGTCAGTATTCCTGAATGGTGGTGTTTGAAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_07500425_07501888.mRNA True 1708 mRNA 0.44 1 7500325 7502032

Neighbor

gene id symbol gene type direction distance location
CI01000029_07426889_07428262 TMEM151BA, TMEM151B coding upstream 71882 7424439 ~ 7428443 (+)
CI01000029_07365981_07371241 HSP90AB1, HSP90BB, HS90B coding upstream 128724 7365981 ~ 7371601 (+)
CI01000029_07338994_07342252 IF2A, EIF2S1B, EIF2S1 coding upstream 157583 7338994 ~ 7342742 (+)
CI01000029_07304652_07330373 NA coding upstream 169869 7304652 ~ 7330456 (+)
CI01000029_07252129_07298828 GPHN, GPHNA, GPHNB, GPHN.L coding upstream 200479 7252129 ~ 7299846 (+)
CI01000029_07503905_07506541 TLR5B coding downstream 1873 7503905 ~ 7506835 (+)
CI01000029_07514095_07516740 NA coding downstream 11974 7514006 ~ 7516742 (+)
CI01000029_07540982_07543852 NA coding downstream 36910 7538942 ~ 7543895 (+)
CI01000029_07602986_07608307 AIDA, AIDA.L coding downstream 100637 7602669 ~ 7608326 (+)
CI01000029_07643406_07651059 NA coding downstream 141374 7643406 ~ 7651381 (+)
G155483 NA non-coding upstream 1526 7498506 ~ 7498799 (+)
G155480 NA non-coding upstream 4029 7495890 ~ 7496296 (+)
G155478 NA non-coding upstream 8311 7491659 ~ 7492014 (+)
G155477 NA non-coding upstream 9171 7490535 ~ 7491154 (+)
G155471 NA non-coding upstream 16051 7483938 ~ 7484274 (+)
G155530 NA non-coding downstream 50473 7552505 ~ 7552704 (+)
G155531 NA non-coding downstream 52571 7554603 ~ 7555012 (+)
G155532 NA non-coding downstream 53894 7555926 ~ 7556192 (+)
G155533 NA non-coding downstream 57211 7559243 ~ 7559584 (+)
G155534 NA non-coding downstream 57825 7559857 ~ 7560191 (+)
CI01000029_06906861_06907157 NA other upstream 592893 6905834 ~ 6908633 (+)
G155083 NA other upstream 1010031 6431535 ~ 6490294 (+)
G155079 NA other upstream 1211927 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 2029979 5461497 ~ 5470346 (+)
G154587 NA other upstream 2228790 5271020 ~ 5271535 (+)
G155522 NA other downstream 132801 7634833 ~ 7637834 (+)
G155627 NA other downstream 429448 7931480 ~ 7932177 (+)
G156007 NA other downstream 1462786 8964818 ~ 9064541 (+)

Expression


Co-expression Network