CI01000029_07602986_07608307 (AIDA, AIDA.L)


Basic Information

Item Value
gene id CI01000029_07602986_07608307
gene name AIDA, AIDA.L
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7602669 ~ 7608326 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_07602986_07608307.mRNA
TTATATAACGCAATTACTTACTAGTTTTACACTCCTATCACAAGTCAACGGAGTTCTCATGAATTATAATGAAGAGATCCCTCTCTCATGTATTAGGACTTTTATTTTGAAAACGCCACTAGTAAGCTCGTCTTCCGGTGCAGTAGCAGGTAGTTCGGTTGCACTCGCATCAGGCCTGTGGCGGTGTGTGGCGGTGCCACCGGTGCATCCGGAGCCCAGTGTGTTTCCCCGGCGGTGCGCAACAATGCGGCGCTGGAGATAAAACTTCACCAGCGATGTCAGAACCCAAAGCTTTCGCGCGACTTTAACCCGAGAAGATGTCAGATGTCACCAAGACCGTCCAGAAATGGCACGCGAGTTTTAAAAAGGGCACGGACTTTGATTCGTGGGGGCAGCTGGTGGAAGCCATCGATGAATATCAAATACTCGCAAGGCAACTTCAGAAAGAGGTGCAGTCATCAAACTTGCATGATTTTACAGAGGAACAGAAGAAAACCCTGGGAAAGTTTGCAACATGCCTTGAAATGCGAAGTGCAGCCTTACAGTGCACACAATCTCAAGAGGAGTTCAAGTTAGAAGACCTGAAAAAACTGGAACCCATTATTAAGAACATTCTGACTTACAACAAAGATTTCCCTTTTGATGTCCAACCAGTGCCTTTGAGGAAGATTCTCGCACCAGGTGAGGAGGAAAACCTTGAGGTTGAGGAGGAGCTGGATGCTGGTACTGGAGCAGGTTCAACACCGTCATTCCCATCAAGGGTCCCAGGTACTCTGTTGCCACGGTTACCCTCGGAGCCTGGAATGACTTTGCTGACGCTGACGATAGAGAAGATCGGTCTGAAGGATGCAGGACAGTGCATTGACCCGTACATCACAGTCAGTGTTAAAGATCTGAACGGTATCGACTTGAATCCAGTTCAGGACACCCCAGTGGCCACGCGGAAGGAGGACACGTATATTCATTTTAGTGTGGAAGTGGAAATCCAGAAACACCTAGAAAAACTACCAAAAGGTGCAGCTATTTTCTTTGAATTCAAACACTACAAACCCAAGAAAAGATTCACCAGCACTAAGTGTTTTGCTTTCATGGAAATGGATGAAATCAAACCAGGTCCCATTGTTATAGAACTGTGAGTACAATTGCATTTAATTA

Function

symbol description
aida Enables phosphatidylinositol binding activity. Involved in negative regulation of JUN kinase activity and negative regulation of determination of dorsal identity. Acts upstream of or within determination of ventral identity. Located in membrane. Is expressed in brain and somite. Orthologous to human AIDA (axin interactor, dorsalization associated).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_07602986_07608307.mRNA True 1155 mRNA 0.46 9 7602669 7608326

Neighbor

gene id symbol gene type direction distance location
CI01000029_07540982_07543852 NA coding upstream 58774 7538942 ~ 7543895 (+)
CI01000029_07514095_07516740 NA coding upstream 85927 7514006 ~ 7516742 (+)
CI01000029_07503905_07506541 TLR5B coding upstream 95834 7503905 ~ 7506835 (+)
CI01000029_07500425_07501888 NA coding upstream 100637 7500325 ~ 7502032 (+)
CI01000029_07426889_07428262 TMEM151BA, TMEM151B coding upstream 174226 7424439 ~ 7428443 (+)
CI01000029_07643406_07651059 NA coding downstream 35080 7643406 ~ 7651381 (+)
CI01000029_07653640_07663101 NA coding downstream 45008 7653334 ~ 7663101 (+)
CI01000029_07672445_07687240 DUSP10 coding downstream 64119 7672445 ~ 7687873 (+)
CI01000029_07885342_07908699 ARHGAP39 coding downstream 275956 7884282 ~ 7909792 (+)
CI01000029_07922221_07926151 NA coding downstream 313895 7922221 ~ 7927536 (+)
G155506 NA non-coding upstream 10699 7591009 ~ 7591970 (+)
G155541 NA non-coding upstream 13914 7588442 ~ 7588755 (+)
G155537 NA non-coding upstream 23619 7578815 ~ 7579050 (+)
G155536 NA non-coding upstream 29809 7572652 ~ 7572860 (+)
G155534 NA non-coding upstream 42478 7559857 ~ 7560191 (+)
G155520 NA non-coding downstream 2998 7611324 ~ 7611757 (+)
G155518 NA non-coding downstream 23389 7631715 ~ 7632713 (+)
G155555 NA non-coding downstream 95812 7704138 ~ 7704382 (+)
G155561 NA non-coding downstream 108138 7716464 ~ 7717158 (+)
G155563 NA non-coding downstream 110577 7718903 ~ 7719218 (+)
CI01000029_06906861_06907157 NA other upstream 695237 6905834 ~ 6908633 (+)
G155083 NA other upstream 1112375 6431535 ~ 6490294 (+)
G155079 NA other upstream 1314271 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 2132323 5461497 ~ 5470346 (+)
G154587 NA other upstream 2331134 5271020 ~ 5271535 (+)
G155522 NA other downstream 26507 7634833 ~ 7637834 (+)
G155627 NA other downstream 323154 7931480 ~ 7932177 (+)
G156007 NA other downstream 1356492 8964818 ~ 9064541 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017725 aida coding NC_007131.7 CM002904.2 51730658 ~ 51753885 (+)