CI01000029_08019292_08036434


Basic Information

Item Value
gene id CI01000029_08019292_08036434
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8019292 ~ 8036758 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_08019292_08036434.mRNA
ATGTCATTCAGGCTTCTGTCAGTGTTGCTCGTGTTGTTCGTGGCTGAAGCTCTCGGCGCTGAACAAGAGAATGAAGTTCTCAAATACACAGACACACGGGACACCACAGAGCAGAATGAAGTAACATTCACCACTGGCAACTTGAGCGATACGTCACACAAACCTTCATTACCAGATATTGATGAGTGTCGCCAGGGCGACCCTGGGCCTTGCGGTTACCATGCCAACTGCACAAACACACCTGGATCCTTCCTGTGCAGCTGTGTTCGAGGTTACCTGATGAGTGCGGACGGATGTAAAGATGTAGACGAGTGTGTGTTAGCTGCCGTAACGGGTCTGCAGGCGTGTGGAAGTGGAGCCGAGTGTAAAAACACACCGGGATCTTTCACCTGCTCCTGTCCAGCGGGATTCGTGCTGGCGCTCGACGGACACAACTGTGTCGACATTGACGAGTGTAATTTCGAGGAGAGCTGCCGGAGGGAACTGGGTAACGTGTGTGTGAACACAGAAGGAAGCTACACGTGTGTGTGTCAGGCTGGATTCAGAGAGGACCGGGCCGCGTGTGTCGGTGGTCTGTGCCGAGGTTTTCTTATATGTGAAGATGTGGATGAGTGTGTGGAGGAGCAGCGCGTGTGTGTCGGTCGAGGGGAGTGTGAGAACACACTGGGCAGTTACAGGTGTGTGTGTCAGCACGGTTACCGTGGTAACGGCACACACTGCACAGACATAAACGAGTGTTTGACCGGGGATCACGGCTGTGACGCCAACGCTCGCTGCGGGAACATCATCGGCTCGTATTTCTGTCAGTGTCATCAGGGATACAGCGGAGACGGACACTCCTGCTACGATGTGGACGAGTGCGCTCAGGATAACGGACTCTGTGAACACGACTGCACAAACCAGCCGGGAACGTACAGCTGCCGCTGTAGCACCGGATACACAACCACTGCAGATGGACACAACTGTACAGACGTGACGTCGTGTGCGCTGAGGAACGGTGGATGTGATCATATCTGCTCTCTGGGGGCAGAAGGTCACGTCCACTGCAGCTGCAGGGCAGGATGGGAGCTGAACGCCGACCAAAGAACCTGTGACGATGTGGACGAGTGTGTGAGTTTTAGCGGCGGCTGTGAGCAGGTGTGTGTGAATCACGCTGGCGGTTTTAATTGCAGCTGTCGCTCGGGCTTTGAGTCGCGGAAAGACGACCCGACAAAATGTCAACCGGTGTGTGAACCTGCCTGTCAGAACTCTGGAGTGTGTGTCGCTCCGAACACCTGCGACTGTCCGGCCGGATACCCTGGACCGGGATGCTCGGCCGTGTGTGAGCTGCCATGCGGTAACGGTGGACGGTGCGTCGCTCCGAACACCTGCCAGTGTCCCTCAGACTACAGCGGGCCGCAGTGTCTCACCCCTCTGTGTTCTCCTCCGTGTGTGAACGGCGGGAGGTGTGTGGACATCAACACCTGCAGCTGCGCAGACGCATGGACAGGAGCTCGCTGTCAGATAGCTGTCACTACACCGTGTGTTCCTCCCTGCCAACATGGTGCTGCCTGCGGCCCTCTGAACACCTGTGTGTGTCCGACGGGGACGAGCGGCATACGCTGTGAGAAACTCACGTGTCCTGTCGTGACTACGGTGGTCAGTATGGCCCGCGCGGTGCGGAAAGGCTTTCGGGAGAGTTACGTGGACCGATGCGGACCCCTGGGAGTCCAACTCTGTACTAAATACAGGATAAACCAGGCGCGTGTGTATCTGCAGGCGTATAGAGTGGGATACAAGATCCAGTGTCCCGACAAAACCACAAGACAAGTCTAGTATACAATCAGACTAAATAAATTATCTTTATTGGCATCGATGGTTCCATGAAGAACCTTTAACATTCATGAAACATTTCCATTCTACAAAAGGTTCTTTAAAGGTTCTTTAGATTTTTTAAATGTCCTTCACATTAAGAAAAAAAAACAGTTCTTTTAAAAAACGATCACTGAAAGGTTCTTTGGGGAAGCAAAAATTATTATTTTATGGCATTGCTGCAAAAAACAAACAAAAAAGACAACAACGTGGAAGCTATATTTTTAGGAGCGTATGATTGTGTATATTGCCTTTTGCACATTGTGCATGTGTATTTTTTTCATACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_08019292_08036434.mRNA True 2139 mRNA 0.52 17 8019292 8036758

Neighbor

gene id symbol gene type direction distance location
CI01000029_08007965_08016092 EEF1DB, EEF1D coding upstream 3143 8007055 ~ 8016149 (+)
CI01000029_07997857_08002279 PYCRL coding upstream 16195 7997696 ~ 8003097 (+)
CI01000029_07933165_07944093 NA coding upstream 75199 7933165 ~ 7944093 (+)
CI01000029_07922221_07926151 NA coding upstream 91756 7922221 ~ 7927536 (+)
CI01000029_07885342_07908699 ARHGAP39 coding upstream 109500 7884282 ~ 7909792 (+)
CI01000029_08053844_08058278 NA coding downstream 17086 8053844 ~ 8058521 (+)
CI01000029_08072926_08079001 PHACTR1 coding downstream 36168 8072926 ~ 8079112 (+)
CI01000029_08140259_08140582 NA coding downstream 103417 8140175 ~ 8140945 (+)
CI01000029_08156225_08174249 SLC22A23 coding downstream 119156 8155914 ~ 8175136 (+)
CI01000029_08198433_08203489 NA coding downstream 161607 8198365 ~ 8203538 (+)
G155683 NA non-coding upstream 52766 7966287 ~ 7966526 (+)
G155682 NA non-coding upstream 55398 7963682 ~ 7963894 (+)
G155632 NA non-coding upstream 58132 7951604 ~ 7961160 (+)
G155649 NA non-coding upstream 75506 7942756 ~ 7943786 (+)
G155648 NA non-coding upstream 76811 7942267 ~ 7942481 (+)
G155667 NA non-coding downstream 23301 8060059 ~ 8063853 (+)
G155674 NA non-coding downstream 28942 8065700 ~ 8066608 (+)
G155665 NA non-coding downstream 47428 8084186 ~ 8092254 (+)
G155689 NA non-coding downstream 59065 8095823 ~ 8096101 (+)
G155691 NA non-coding downstream 61580 8098338 ~ 8098596 (+)
G155627 NA other upstream 87115 7931480 ~ 7932177 (+)
G155522 NA other upstream 381458 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 1111860 6905834 ~ 6908633 (+)
G155083 NA other upstream 1528998 6431535 ~ 6490294 (+)
G155079 NA other upstream 1730894 6282685 ~ 6288398 (+)
G156007 NA other downstream 928060 8964818 ~ 9064541 (+)

Expression


Co-expression Network