CI01000029_08053844_08058278


Basic Information

Item Value
gene id CI01000029_08053844_08058278
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8053844 ~ 8058521 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_08053844_08058278.mRNA
GGGATGAATATGAGCGTGTCCTTCAAGAAGGTTCTGGATTTGAGTTCTGGAGACTCTCACAACGCTGGAATGAAGCCAATAACCTTTGTTAGACAGGTCATAGCCGGATGTTTGTATCCCAGTCTCCTGCAGAGCGACACTCTTCCTCCTGACGCTCGTCTCAGAGCTCAGGTGTTACTCCGTCACTTTGATGGAGGCAGTATCGGTTCGTACACTGAGTCCTGTGGATCGATGTACGTGAGAAACACTATAGCAGAGTCCATTTCTCTGCGGGATGGAGGCGTCCCATCCAGTCCAGAGCAAGTCTTCATCACTGTTGAGACTCAGAGAGGTTTGATGGTGATGATGCGACTGCTGTGTCAGTCAGAGGGCGTGTCTGCGGTTATGATCCCAGACCCCGCCCCTCACACTCTGACACGCCTCCTGGAGAGGATGGCCGTGGTTCCGGTGCCCTATCGGCTGCAAGAGCAGTGTGGGTGGAGCGTGGAGAGGGCGGAGCTTAACAGAGCCATCCAGGCGTCGAGAGGGCGGTGCTCTCCACGGGCAATTTATATCAGTAACCCTGGCGACCCTACAGGGCACGTCCAGAGCAGGGAGTCTATCGAGGATGTGATTCGCTTCGCTGCCGATGAAGAACTTTTCTTGTTGGTCAACGAGGTTTATCAGAACACGGTTTTTGCGGACGGCTCAGAGTTCGTGTCCTATAAGCGTGTTCTGGCTGAGATGGGAGCCCCTTATTCTGAGAGCGTTCAGCTGGCCTCGCTCCATTCGCTCTCCAACGGCATCATGGGAGAATGTGGTTTCAGGACGGGTTATATGGAGCTGGTGAATGTCGATCCAGCTGTAATGTTATACACTGAGGTTCTTCTGACAGGAGATTTGTGCCCTCCTGTGATTGGTCAGATCGCTCTCGATGTCATGGCTGATCCGCCCCATCCTGGAGAACCTTCCTACACTTTATACACACAGGAGGTGGCATCTAGGCTAATGACTCTGAAGTGTAACGTTTCCAGGGCTGTCAAGGTCATTAATGATCTTCCGGGATTCAGCTGTCTGTCAGTTCAGAGCGGAATCTTCATCTATCCGCACCTGACTTTTCCTCACTCAGCTGTGACAAATGCACAGATGAACTGGAGGAGGCTCTCCGTTGCCTTCAATGTTTTCACTATCAGTTCCTCAAAGAATACTGTGAAATTACAATTAGTGCACCAGAACAGAGCAATTAAATAACAGTTTAATTAATGCACAAATTCATATAAGCTTACAGATGAAACTATACTTAAGTCATTACTATTAGGCAGTATATTTTCATGTAAATCGTATTACTTGATGATATCATTATAAAATAGCAGCAACATTCTGGGATAATTTATGGTGTTAGTTTGATAAAATTAACATTTAAAAAAAATGACCTCCTCATGTAACAGTAACTGTCAATTTTTTTGTCAAGGTTTAAATGGCCAATTATAATTA

Function

NR:

description
Gpt2l protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_08053844_08058278.mRNA True 1473 mRNA 0.47 9 8053844 8058521

Neighbor

gene id symbol gene type direction distance location
CI01000029_08019292_08036434 NA coding upstream 17086 8019292 ~ 8036758 (+)
CI01000029_08007965_08016092 EEF1DB, EEF1D coding upstream 37695 8007055 ~ 8016149 (+)
CI01000029_07997857_08002279 PYCRL coding upstream 50747 7997696 ~ 8003097 (+)
CI01000029_07933165_07944093 NA coding upstream 109751 7933165 ~ 7944093 (+)
CI01000029_07922221_07926151 NA coding upstream 126308 7922221 ~ 7927536 (+)
CI01000029_08072926_08079001 PHACTR1 coding downstream 14405 8072926 ~ 8079112 (+)
CI01000029_08140259_08140582 NA coding downstream 81654 8140175 ~ 8140945 (+)
CI01000029_08156225_08174249 SLC22A23 coding downstream 97393 8155914 ~ 8175136 (+)
CI01000029_08198433_08203489 NA coding downstream 139844 8198365 ~ 8203538 (+)
CI01000029_08288440_08301175 NA coding downstream 229919 8288440 ~ 8301357 (+)
G155662 NA non-coding upstream 6828 7969504 ~ 8047016 (+)
G155683 NA non-coding upstream 87318 7966287 ~ 7966526 (+)
G155682 NA non-coding upstream 89950 7963682 ~ 7963894 (+)
G155632 NA non-coding upstream 92684 7951604 ~ 7961160 (+)
G155649 NA non-coding upstream 110058 7942756 ~ 7943786 (+)
G155667 NA non-coding downstream 1538 8060059 ~ 8063853 (+)
G155674 NA non-coding downstream 7179 8065700 ~ 8066608 (+)
G155665 NA non-coding downstream 25665 8084186 ~ 8092254 (+)
G155689 NA non-coding downstream 37302 8095823 ~ 8096101 (+)
G155691 NA non-coding downstream 39817 8098338 ~ 8098596 (+)
G155627 NA other upstream 121667 7931480 ~ 7932177 (+)
G155522 NA other upstream 416010 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 1146412 6905834 ~ 6908633 (+)
G155083 NA other upstream 1563550 6431535 ~ 6490294 (+)
G155079 NA other upstream 1765446 6282685 ~ 6288398 (+)
G156007 NA other downstream 906297 8964818 ~ 9064541 (+)

Expression


Co-expression Network