G153663


Basic Information

Item Value
gene id G153663
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 4294761 ~ 4294978 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU174500
CTTGCATTCTCGCTAGATGATAATTGCTACCATGGGATAATTGTCAATATCGTAGCTCGGTTTTGATAACGAGCAACAAAATATGCCCTGGAGGAACCTAGCGAGGCTGTCTCATGCCACACATGTAGACAATTACTCCACACCCATCTGCCATTAGGCAGCGTTACAGAGAATGTTTTCTACTTAATTAAATCCAAATCTCTCAATAGTGGAGCCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174500 True 218 lncRNA 0.43 1 4294761 4294978

Neighbor

gene id symbol gene type direction distance location
CI01000029_04253844_04257502 NA coding upstream 37083 4253726 ~ 4257678 (+)
CI01000029_04223968_04232159 CLIC4, CLIC5, CLIC5B coding upstream 62452 4223544 ~ 4232309 (+)
CI01000029_04213048_04215977 NA coding upstream 78451 4213048 ~ 4216310 (+)
CI01000029_04143243_04143794 NA coding upstream 150710 4143243 ~ 4144051 (+)
CI01000029_04099307_04107542 LIN9 coding upstream 187214 4099307 ~ 4107547 (+)
CI01000029_04389599_04399047 OPN8A coding downstream 94621 4389599 ~ 4399065 (+)
CI01000029_04409794_04419021 OPN8B coding downstream 114816 4409794 ~ 4419021 (+)
CI01000029_04478628_04483582 NA coding downstream 181442 4476420 ~ 4483601 (+)
CI01000029_04521600_04521771 NA coding downstream 226622 4521600 ~ 4522751 (+)
CI01000029_04590418_04605290 NA coding downstream 295306 4590284 ~ 4605694 (+)
G153660 NA non-coding upstream 8393 4286112 ~ 4286368 (+)
G153659 NA non-coding upstream 8990 4285544 ~ 4285771 (+)
G153658 NA non-coding upstream 9305 4285226 ~ 4285456 (+)
G153654 NA non-coding upstream 24322 4270217 ~ 4270439 (+)
G153651 NA non-coding upstream 26683 4267747 ~ 4268078 (+)
G153672 NA non-coding downstream 35552 4330530 ~ 4362038 (+)
G153703 NA non-coding downstream 132730 4427708 ~ 4428185 (+)
G153707 NA non-coding downstream 253370 4548348 ~ 4914909 (+)
G153775 NA non-coding downstream 398757 4693735 ~ 4709748 (+)
G153475 NA other upstream 732757 3545125 ~ 3562004 (+)
G152451 NA other upstream 1531822 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 2766862 1526754 ~ 1527899 (+)
G151495 NA other upstream 3922839 366541 ~ 371922 (+)
G151415 NA other upstream 4069516 170521 ~ 225245 (+)
G153790 NA other downstream 438611 4733589 ~ 4740107 (+)
G154587 NA other downstream 976042 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 1162263 5461497 ~ 5470346 (+)
G155079 NA other downstream 1987707 6282685 ~ 6288398 (+)
G155083 NA other downstream 2136557 6431535 ~ 6490294 (+)

Expression


Co-expression Network