G154352


Basic Information

Item Value
gene id G154352
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 4931979 ~ 4932238 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU175249
ATAGCGTTCAGCCGCACAGAAACGGTTCCCCTCAATGAAATACACAACAGAAAACTGTTCTCAGAGCACACTGAATCTCATGCAGCATGACTCCCTGATAAAACTGCTGTTATGGATGAGACTACAAAGATAAAGTCCTGATTATACAGCATCTTCAAACTTCACATGCAAAACACTGAGGGGTCAATTTACTAACAGTTGCGCTACTTTAAATGCAGTTTTTATTGCAAAACCCTGCATCTTATTCATGAACCACTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175249 True 260 lncRNA 0.40 1 4931979 4932238

Neighbor

gene id symbol gene type direction distance location
CI01000029_04590418_04605290 NA coding upstream 326285 4590284 ~ 4605694 (+)
CI01000029_04521600_04521771 NA coding upstream 409228 4521600 ~ 4522751 (+)
CI01000029_04478628_04483582 NA coding upstream 448378 4476420 ~ 4483601 (+)
CI01000029_04409794_04419021 OPN8B coding upstream 512958 4409794 ~ 4419021 (+)
CI01000029_04389599_04399047 OPN8A coding upstream 532914 4389599 ~ 4399065 (+)
CI01000029_04981453_04995255 NA coding downstream 48907 4981145 ~ 4995662 (+)
CI01000029_05041887_05044363 NA coding downstream 108759 5040997 ~ 5045063 (+)
CI01000029_05104260_05107686 BMP2B coding downstream 170981 5103219 ~ 5107804 (+)
CI01000029_05232703_05233677 TAAR11 coding downstream 297954 5230192 ~ 5234070 (+)
CI01000029_05267765_05268790 TAAR64, TAAR13E, TAAR13D, TAAR13C, TAAR13B coding downstream 335452 5267690 ~ 5268884 (+)
G153707 NA non-coding upstream 17070 4548348 ~ 4914909 (+)
G153775 NA non-coding upstream 222231 4693735 ~ 4709748 (+)
G153703 NA non-coding upstream 503794 4427708 ~ 4428185 (+)
G153672 NA non-coding upstream 569941 4330530 ~ 4362038 (+)
G154353 NA non-coding downstream 8229 4940467 ~ 4940703 (+)
G154358 NA non-coding downstream 17066 4949304 ~ 4949565 (+)
G154360 NA non-coding downstream 21465 4953703 ~ 4953910 (+)
G154361 NA non-coding downstream 27257 4959495 ~ 4959708 (+)
G154366 NA non-coding downstream 31110 4963348 ~ 4963568 (+)
G153790 NA other upstream 191872 4733589 ~ 4740107 (+)
G153475 NA other upstream 1369975 3545125 ~ 3562004 (+)
G152451 NA other upstream 2169040 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 3404080 1526754 ~ 1527899 (+)
G151495 NA other upstream 4560057 366541 ~ 371922 (+)
G154587 NA other downstream 338782 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 525003 5461497 ~ 5470346 (+)
G155079 NA other downstream 1350447 6282685 ~ 6288398 (+)
G155083 NA other downstream 1499297 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 1973950 6905834 ~ 6908633 (+)

Expression


Co-expression Network