G155079


Basic Information

Item Value
gene id G155079
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6282685 ~ 6288398 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176089
GATTTTTAGGTTTTTATTTTCAATAAAAATCAAGACCATTAACAATAACGTTAAAAAATTCAACAAAGTAAAAAATAGTCTAGAAATATTCCGTATGCCTGTCAGGAAATATGGATGCATTTTCGTTTATTCTCCTTCGTTCTTTCAAATTTTGATCTATTATTTAATAGTTGTTAACCCTACATTTCATTTGTTTTGTGTATTTATTTAACATAGATATAGGCCATCTTTGCATTCGTTACTCGCTAAAAACTGCTATTTTTATAAAGTAATTTAGTGTAAATATTAGTGGCATTATTCATATATACATCTTTAACATTTAAGGTGACCTAAACGGACCTGTGACAACAGTTTGATAGCATCGTCCGTCTGTTTATTCGGTTTTCAGTCACGTGAACAAACACTGACAGCGAAATCCCACATAATCTCACTGTAAACATGTTATCTGTGACTGTTGAGTAGAAATCAGCCATATAGAAAGATAGTTCACTTTTGACATGCCTTTATTAAGCAGAAATGAATTTATAAAAATAGATATGTGTACCAACTCAATAGGTCATTCAATATCATACAAACACGAAAATGCAATGACATGGACAGTTTGATTTAATTTCCATATGGCGAATGACTCTAACAATATTGCTTTATAACTAGAAAAGTCGCAGTCCATTTATAACAACAGCCTGACGCTACATTTATTTGCACCAAAGAACAAGAAAAAAAAAATCTACTGCAAATATTGCAGAAATCCTCTGTGGCGTCTCTCCACAGCTTCAGATCCCACTTTTCCTTAATGGTGTGAAACATTCAGGAGTGTTTTATCCAGATGAGCGAGTGTTTGAAGCTGCACGTGAAGGATGAAGAGATGAGTTGTTTTCTCTGCTCTTATGACTCTGAGAGTCCATGAACGGCGCTCAGACTCTCGTGCTGGTGTTTGCTCACTGGACTCTTTCTTCCTACAGCTTCTCGGGGCGTGTTTTTGAAGGATATGGCGCTGTGCAGGTTCGGGCTCTGTATCATGGACCCGCTGTTGGGATGGGTGAGGCTCGCGCCCTGAGACTGCCAGTGCCCGTAGTTACCCGCGTGCCCACCGTAAACACCGTACTGATTAGTGGCGGAGTACGCGCACGCAGGAACATACCCCGATAAATTTGATGAAGCCTGCGTGTACTTGATGTCACTTTCTATAGGAGGTTTCTCGATCCCGTTGACTCCGTGCATGGAAGGAAATGAAGGTCTGTTAACACCCGTCCAGTCCTCCATTTTCGGCTGATAACTCTCTGTTCCAGCAATTGCTGAGGGATCCATGAAAGCCCGTATTCCTAATATGTTGCTGACGGTGTGCACGGAGGGCCAGGCCCGGGACAGGCTGACTGACACAGCCGGAGGGCTGCCCAGTTTGGACCCGGTCGGAGACATGGCGTTCGGGTATGGATATGAATACACGGGATTATATGAGATCTGCGGTGGAGAGGGTTTGCTGTCGTACTGACTCGGCTGAGACAGGTTCCCGATCTTGTTTCTTAAAATGCGACTGATGGAGCTCACAGACGGAACATTATATTTGTCACACACTCCGTCCGCCAGCAGTCTGTCGCGTATTTCCCAAGCAAATATTCCAGGATCGCCCTGTTTATAATCCCTTATGCTCTTCACCACGTTTGGCGTCGTGACCCGGGGTTTACTCCCACCGATAGCACCGGGTAAAATGGAGCCGGTCTCGTTGTATCTGGCTAGGATTTTGCTCACACAGCCATGAGAGACCCGGAGCTGTCGACTTATGTCACACGGCCTGATTCCGAGCTGCGCCAGTTCGACGATTCGGATCCGGATCGCATTGGGAAGAGGCCGACCGTTGACAAACACACCGCCGAGCTGGTTCACCTCCCCGTACGTCTGATCATTTGCATAGTGATATTTCCCTACAGTGGTTGTGCTCCTTTAACCTTTAACTGTGCTGCTGTAGTCTCGTGCAGCATTGGAGAGGTTTCCCCGTGTCTCCCGTTAGGACTGCCCTCTTCTTCTTCTTTTTTTATGGCTGAAGTGTCTGAGTTTAGGACTGAGCAGGTTTTTACAGTAATCTTTGATCCACTTGAGAAACTGCGTCCGTCCAGCAGACTGGCTCGTGCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176089 True 2131 TUCP 0.45 5 6282685 6288398

Neighbor

gene id symbol gene type direction distance location
CI01000029_06214396_06222690 NA coding upstream 59950 6212878 ~ 6222735 (+)
CI01000029_06086495_06092753 NA coding upstream 188826 6086495 ~ 6093859 (+)
CI01000029_06076254_06083211 XKR5 coding upstream 198474 6076121 ~ 6084211 (+)
CI01000029_06066859_06073942 NA coding upstream 208711 6066859 ~ 6073974 (+)
CI01000029_06015438_06024591 HADHA, HADHAA coding upstream 257602 6015438 ~ 6025083 (+)
CI01000029_06294088_06295613 NA coding downstream 4621 6293019 ~ 6296026 (+)
CI01000029_06305668_06307332 NKX2.4B coding downstream 16847 6305245 ~ 6307675 (+)
CI01000029_06347167_06348123 NA coding downstream 58262 6346660 ~ 6348169 (+)
CI01000029_06443365_06447942 CRNKL1 coding downstream 154967 6443365 ~ 6447942 (+)
CI01000029_06453008_06476863 NA coding downstream 164610 6453008 ~ 6477090 (+)
G155072 NA non-coding upstream 20211 6262175 ~ 6262474 (+)
G155061 NA non-coding upstream 36042 6246338 ~ 6246643 (+)
G155060 NA non-coding upstream 36710 6245683 ~ 6245975 (+)
G155041 NA non-coding upstream 118768 6163680 ~ 6163917 (+)
G155032 NA non-coding upstream 119293 6162651 ~ 6163392 (+)
G155087 NA non-coding downstream 34693 6323091 ~ 6334951 (+)
G155110 NA non-coding downstream 54150 6342548 ~ 6342771 (+)
G155121 NA non-coding downstream 93069 6381467 ~ 6381786 (+)
G155124 NA non-coding downstream 96366 6384764 ~ 6385040 (+)
G155128 NA non-coding downstream 103378 6391776 ~ 6391993 (+)
CI01000029_05461497_05468985 BATF other upstream 812339 5461497 ~ 5470346 (+)
G154587 NA other upstream 1011150 5271020 ~ 5271535 (+)
G153790 NA other upstream 1542578 4733589 ~ 4740107 (+)
G153475 NA other upstream 2720681 3545125 ~ 3562004 (+)
G152451 NA other upstream 3519746 2761594 ~ 2762939 (+)
G155083 NA other downstream 143137 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 617790 6905834 ~ 6908633 (+)
G155522 NA other downstream 1346435 7634833 ~ 7637834 (+)
G155627 NA other downstream 1643082 7931480 ~ 7932177 (+)
G156007 NA other downstream 2676420 8964818 ~ 9064541 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_018435 pax1b coding NC_007131.7 CM002904.2 48694056 ~ 48701593 (-)