G155110


Basic Information

Item Value
gene id G155110
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6342548 ~ 6342771 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176129
GTGATTATTTTCTTTTGTCCCTTTGCATGCCGCTGTAATAGTATGAAAAAGGACAACATATACTGCACATTTGTGGTCTGTTCTCCCGATATAATTTACGATATATCCCATTAATAATTCACTGGAATGCACGAAGAATCTCTCGTTTTTCTCCTCAAAGCCTCACGTCTCTTTCCAGGTTTGTTTTCACAGGTAAATACAATTTATTATCTGTAAAAATGATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176129 True 224 lncRNA 0.35 1 6342548 6342771

Neighbor

gene id symbol gene type direction distance location
CI01000029_06305668_06307332 NKX2.4B coding upstream 34873 6305245 ~ 6307675 (+)
CI01000029_06294088_06295613 NA coding upstream 46522 6293019 ~ 6296026 (+)
CI01000029_06214396_06222690 NA coding upstream 119813 6212878 ~ 6222735 (+)
CI01000029_06086495_06092753 NA coding upstream 248689 6086495 ~ 6093859 (+)
CI01000029_06076254_06083211 XKR5 coding upstream 258337 6076121 ~ 6084211 (+)
CI01000029_06347167_06348123 NA coding downstream 3889 6346660 ~ 6348169 (+)
CI01000029_06443365_06447942 CRNKL1 coding downstream 100594 6443365 ~ 6447942 (+)
CI01000029_06453008_06476863 NA coding downstream 110237 6453008 ~ 6477090 (+)
CI01000029_06494856_06495812 NA coding downstream 151620 6494391 ~ 6495847 (+)
CI01000029_06724205_06734079 HMBOX1B, HMBOX1 coding downstream 381434 6724205 ~ 6735582 (+)
G155087 NA non-coding upstream 7597 6323091 ~ 6334951 (+)
G155072 NA non-coding upstream 80074 6262175 ~ 6262474 (+)
G155061 NA non-coding upstream 95905 6246338 ~ 6246643 (+)
G155060 NA non-coding upstream 96573 6245683 ~ 6245975 (+)
G155041 NA non-coding upstream 178631 6163680 ~ 6163917 (+)
G155121 NA non-coding downstream 38696 6381467 ~ 6381786 (+)
G155124 NA non-coding downstream 41993 6384764 ~ 6385040 (+)
G155128 NA non-coding downstream 49005 6391776 ~ 6391993 (+)
G155142 NA non-coding downstream 89177 6431948 ~ 6432805 (+)
G155162 NA non-coding downstream 171956 6514727 ~ 6514978 (+)
G155079 NA other upstream 54150 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 872202 5461497 ~ 5470346 (+)
G154587 NA other upstream 1071013 5271020 ~ 5271535 (+)
G153790 NA other upstream 1602441 4733589 ~ 4740107 (+)
G153475 NA other upstream 2780544 3545125 ~ 3562004 (+)
G155083 NA other downstream 88764 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 563417 6905834 ~ 6908633 (+)
G155522 NA other downstream 1292062 7634833 ~ 7637834 (+)
G155627 NA other downstream 1588709 7931480 ~ 7932177 (+)
G156007 NA other downstream 2622047 8964818 ~ 9064541 (+)

Expression


Co-expression Network