G155083


Basic Information

Item Value
gene id G155083
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6431535 ~ 6490294 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176095
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTCTGCCTGATTTCCTTTATTTATAGTTTTTCATTTTAAATACTTGAACATTTTGTGTATTCAGAGTTTTGTTTAAAGCATACGTTCCAAGCAAATAAATTTTAAATGAAGATTCATGCAATATAATCACTGCGTACTGTATATTTCAATATGACAGATCACACTGTTGTACTGTCTGCCCTGCTCTGTGGTTCAGATTCAGGTCATGGGGAGATGAAGCGACCCCAGAAGATGATGCTCTTGGTGAGGTTGTGTCGGATGAAGAATAAGAAGGGGTGGTCTGCCACGAAACTCTCTGGGCTTTTACTTTTAGCAAATGACTTCATCACTCCACCACTGCCTCCTTCTGCTTCTGTGCCTTTTTCATTCACCTCCACAAAAGACTTGTGCACCACTTTGGACAGCTTCAGCGGTCCAGGCGCCATGCCAGATAAGTCACACTTATCACCAAACACATCAGTTGTGCCCAGAGCCTTCAGGGCCTCCTCCAGATCATATTTCTCCTGCATCTTAAAGATGGGTATTTCAACAGTCACCTCTGTGGGAAACATGTTGTCCGGCTCAGTCCACTCCTGAAGCTTCTCATAAGTGATCGATTCTACCTTTTGTAGCCCATCTTTCTTGTTTGGGAGTATAATGAGCATGCTCAGATCTTTATTCCTATAAGGGATCTCCAGAATCCGAGCTTCAGTGGGAAGTTGTTGTTGCATGTGTGGGATGTTACCCAGAGGAAACTTGTTCGTCTGACGCATCATTTGCCAGTTTACTCTTTTCTCCTGGTGGCAGGAACACGTGTGAAAGACTTGCCCCACTTATCCCTGAAGTACACCGCGCTGACTAGAGCAAGACTCGTGTCCTTAGAAACATCTCCTTGATCCAACAAATTCTTAATTTGATCTAAAATAGAAAGACAAAACATCAATCAGAAGAGTGAGAAATTATGAGAATGTGGTCTAATAGACTATAGTCTAATAGTTAGGCCTTTAATTGAATTACCCCTGGTCTTCTTCTCCACCCAGGTGTTGATTTTTTCTCTCGCAGCATCAGGATTTGTCTTGAAGTCAACATTCCTCACGCTGGCAAAACACCACTCCTCACAATTGTCTAGGAAATCCTAACATCATCAATAGAAAGAGACCCAGGCATCTCACTGAATGATGCATTACTTTACTGTCATTTTCAGGAAGTAAATTAACCAACAGCAACTCACATCATAAAAGTTTAATGTGCTTTCTCCAAACATGCGATTAACGAGCTGCAGGCTTCTGTACTTCCCTCCTTTGTAGAGCGCCTCATACAGATCGTGGTATATAATTCTTATATGGTCAAAGTGGAGCGTCTTAAGAGAAACAAAACAGGATATTGTTTAATATTGAGTGAATTGTATTCAGCGAATTTGAGACTGTGAAGTGAAGAGTGTTTTGAAGAAAGCATTGTAAAAATGAACATGTATTTCACAATGTAGAATCGCAGCAATCAATGCATTAAAGGAGACCTGTTATGCAAAATTCATTTTTACATGGTGTTTGAACATAAATGTGTGTTGACAGTGTTACACAGCCACCTTATAATGATAAAAATCGCGCAGGAAACGGCGTTCCAAAAATGAAATGCTCAAGTTAAAAGAAGTTTAAACTTTTAAAAAACACGTCTCGACACCTTGTGTTTTCAACTGCCCGTGCGTTTTTAGACACAAAGACACATGTGTGAATGGCCCCGAATGGGAGGAAAAAAAAGCAAGGTCAGTCTAGCACGTGTTTACATAAAAATAAAAAATCAGCGCAGTGGAATGCAAAAATACATTCTGTGGAAACGGCCACATGATGTTTCTCCTGTTTTTTTTTTTTTTGTTGCCGGAGTATCTGTATCAAGTATCTTGTAAAAAGAGGCATAATGGGTCCCCTTTAAAGCATTCATAAACATGAGATGACAGTTTATAGAGAGTTAACTGAGCTATTTAGAGGTTTGAGCGCACCTTATACATCTGATCGGCAGTTTTGCCATTGGCACCCAGGAGGACCAGGCCCAATGCAGAGGAGATGCTCAGGGGTGAGAACAACACATTGTCTGTGTTGCCCTTACAGAGCACTTTTAACATGTCAATGGAGAATTTTGAGTTTCCCAAAATCACAGGTTCAATATCTGGTTCCATTTTGTTTACAGTCTAGAATGAAGGAAATCCACTTTAAACATCATGTTAGACCAGCACAGAAAACAGTATAGAAGAACAAGAATGAAAAAAATCAGAAAACAAACGTTAATTTCACCTGATGTGCTCTTCAGTCTTCAAAACCTAAAAAGTCAAATGCAGAATTTTTATATACAATCAAAACAACAGAAAAGCCCAAAGACAGTGCTTTAGCTTTTACTTTCAATAAAAAAGGTTTTCAATTTTCATCCTACATGGTCTACCACATGTAATATACATATTTGTTTTTACATCCATACTGTGCAGAAGTTATAGCCATCTGGTGAAAAACAAAAAATGCTGTAATGTGACAAAGTTCTTGAATGGTTTTTATTTATCAGTTAACCTCAAATGAAATGCAGTAACCAAAAACGAAATTAAATCAATGTTTGTTGGGCCCACCCTTTGCCTTCAGAACACCAAGTGCTTGATCTGGAAAGTGTCCGTGTGCTATATGTTTTTAACAGTGTGCAAAAATTTTACTGGACTATTAAATTTTTTGCAAAATAAATGTTAAAGTTAATGAGGTGTATCTGAAATGAATATTTCTTACTGACAGAAGATATAAAATTACCATTTTAAGTCAAATGTTTTTGTGAAACATTTTGCACCGTACATGTATATCAAATGTTATTACAACTACTGTTGTAGTTAAAAATCAAGTTTCTGAAATACTTACTGATAAAGAAAGCGAAGATTTGATCTCTCCTTGATATGAGGTGCGTCTTCACAACTGGCCA
>TU176099
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTCTGCCTGATTTCCTTTATTTATAGTTTTTCATTTTAAATACTTGAACATTTTGTGTATTCAGAGTTTTGTTTAAAGCATACGTTCCAAGCAAATAAATTTTAAATGAAGATTCATGCAATATAATCACTGCGTACTGTATATTTCAATATGACAGATCACACTGTTGTACTGTCTGCCCTGCTCTGTGGTTCAGATTCAGGTCATGGGGAGATGAAGCGACCCCAGAAGATGATGCTCTTGGTGAGGTTGTGTCGGATGAAGAATAAGAAGGGGTGGTCTGCCACGAAACTCTCTGGGCTTTTACTTTTAGCAAATGACTTCATCACTCCACCACTGCCTCCTTCTGCTTCTGTGCCTTTTTCATTCACCTCCACAAAAGACTTGTGCACCACTTTGGACAGCTTCAGCGGTCCAGGCGCCATGCCAGATAAGTCACACTTATCACCAAACACATCAGTTGTGCCCAGAGCCTTCAGGGCCTCCTCCAGATCATATTTCTCCTGCATCTTAAAGATGGGTATTTCAACAGTCACCTCTGTGGGAAACATGTTGTCCGGCTCAGTCCACTCCTGAAGCTTCTCATAAGTGATCGATTCTACCAACTTTTTGTAGCCCATCTTTCTTGTTTGGGAGTATAATGAGCATGCTCAGATCTTTATTCCTATAAGGGATCTCCAGAATCCGAGCTTCAGTGGGAAGTTGTTGTTGCATGTGTGGGATGTTACCCAGAGGAAACTTGTTCGTCTGACGCATCATTTGCCAGTTTACTCTTTTCTCCTGACATTTAAAACACAGACAGATTGGACATTAGTGATACTGATGTTAACACTTGAACCTGCAGTATTAGCTGTGCTGCAGTCTCACTTACCTTACAAAATATAAGTGTACTTCATTTTTATTAAGTATACTTATTTTTAATATTTTTATGTATACTATGTAGTAAGTATACTAATGTAATGTCAATGTAATAGTAGTTTACTTGTAAGTGTACTATTTCAATACTACTTGGGACTAAATTGGCTCACTTTTTAGTGTGTAAAGTATACTTTTAAGTACACTTTAAGTGTAACAGTAGTAACTTTGAGTACACAACTATAGTTTACATCTATGTTTTTTGTTTGTATTGCATCTATTCTACAAGTGAACTTATAGGTATACTGATAGTTTATTAGTTAAATACTTTTTTTAGTTTATGAAAGTACACTGTAAAAAGAAATCCATTAAATTTAGGGTAAATAAACCAGCAGCTGTGGTTGCCAGACGTTAGCAATGATTTAAGCTTTACAGATTCAACTTAAATTTACAGTAAAATACTGTATTTCATTAACTGATATAACAGAACTAATTTCTGTTTTGTACCTTTATAATACACAGACAACCATCAAACACATTGGTGCCAGCACCAGCATTTTTTATCATTTTCACAAACATTTCAAAGCTCCCATAATATTTTGTAGTATGAATATGTGAACATGGAATATATCGAAAGAAAAAAAACAGAGCCTCTGCTTTACCTTGGTGGCAGGAACACGTGTGAAAGACTTGCCCCACTTATCCCTGAAGTACACCGCGCTGACTAGAGCAAGACTCGTGTCCTTAGAAACATCTCCTTGATCCAACAAATTCTTAATTTGATCCTGGTCTTCTTCTCCACCCAGGTGTTGATTTTTTCTCTCGCAGCATCAGGATTTGTCTTGAAGTCAACATTCCTCACGCTGGCAAAACACCACTCCTCACAATTGTCTAGGAAATCCTAACATCATCAATAGAAAGAGACCCAGGCATCTCACTGAATGATGCATTACTTTACTGTCATTTTCAGGAAGTAAATTAACCAACAGCAACTCACATCATAAAAGTTTAATGTGCTTTCTCCAAACATGCGATTAACGAGCTGCAGGCTTCTGTACTTCCCTCCTTTGTAGAGCGCCTCATACAGATCGTGGTATATAATTCTTATATGGTCAAAGTGGAGCGTCTTAAGAGAAACAAAACAGGATATTGTTTAATATTGAGTGAATTGTATTCAGCGAATTTGAGACTGTGAAGTGAAGAGTGTTTTGAAGAAAGCATTGTAAAAATGAACATGTATTTCACAATGTAGAATCGCAGCAATCAATGCATTAAAGGAGACCTGTTATGCAAAATTCATTTTTACATGGTGTTTGAACATAAATGTGTGTTGACAGTGTTACACAGCCACCTTATAATGATAAAAATCGCGCAGGAAACGGCGTTCCAAAAATGAAATGCTCAAGTTAAAAGAAGTTTAAACTTTTAAAAAACACGTCTCGACACCTTGTGTTTTCAACTGCCCGTGCGTTTTTAGACACAAAGACACATGTGTGAATGGCCCCGAATGGGAGGAAAAAAAAGCAAGGTCAGTCTAGCACGTGTTTACATAAAAATAAAAAATCAGCGCAGTGGAATGCAAAAATACATTCTGTGGAAACGGCCACATGATGTTTCTCCTGTTTTTTTTTTTTTTGTTGCCGGAGTATCTGTATCAAGTATCTTGTAAAAAGAGGCATAATGGGTCCCCTTTAAAGCATTCATAAACATGAGATGACAGTTTATAGAGAGTTAACTGAGCTATTTAGAGGTTTGAGCGCACCTTATACATCTGATCGGCAGTTTTGCCATTGGCACCCAGGAGGACCAGGCCCAATGCAGAGGAGATGCTCAGGGGTGAGAACAACACATTGTCTGTGTTGCCCTTACAGAGCACTTTTAACATGTCAATGGAGAATTTTGAGTTTCCCAAAATCACAGGTTCAATATCTGGTTCCATTTTGTTTACAGTCTAGAATGAAGGAAATCCACTTTAAACATCATGTTAGACCAGCACAGAAAACAGTATAGAAGAACAAGAATGAAAAAAATCAGAAAACAAACGTTAATTTCACCTGATGTGCTCTTCAGTCTTCAAAACCTAAAAAGTCAAATGCAGAATTTTTATATACAATCAAAACAACAGAAAAGCCCAAAGACAGTGCTTTAGCTTTTACTTTCAATAAAAAAGGTTTTCAATTTTCATCCTACATGGTCTACCACATGTAATATACATATTTGTTTTTACATCCATACTGTGCAGAAGTTATAGCCATCTGGTGAAAAACAAAAAATGCTGTAATGTGACAAAGTTCTTGAATGGTTTTTATTTATCAGTTAACCTCAAATGAAATGCAGTAACCAAAAACGAAATTAAATCAATGTTTGTTGGGCCCACCCTTTGCCTTCAGAACACCAAGTGCTTGATCTGGAAAGTGTCCGTGTGCTATATGTTTTTAACAGTGTGCAAAAATTTTACTGGACTATTAAATTTTTTGCAAAATAAATGTTAAAGTTAATGAGGTGTATCTGAAATGAATATTTCTTACTGACAGAAGATATAAAATTACCATTTTAAGTCAAATGTTTTTGTGAAACATTTTGCACCGTACATGTATATCAAATGTTATTACAACTACTGTTGTAGTTAAAAATCAAGTTTCTGAAATACTTACTGATAAAGAAAGCGAAGATTTGATCTCTCCTTGATATGAGGTGCGTCTTCACAACTGGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176095 False 2977 TUCP 0.38 5 6431535 6490294
TU176099 True 3619 TUCP 0.36 5 6431535 6490294

Neighbor

gene id symbol gene type direction distance location
CI01000029_06347167_06348123 NA coding upstream 83366 6346660 ~ 6348169 (+)
CI01000029_06305668_06307332 NKX2.4B coding upstream 123860 6305245 ~ 6307675 (+)
CI01000029_06294088_06295613 NA coding upstream 135509 6293019 ~ 6296026 (+)
CI01000029_06214396_06222690 NA coding upstream 208800 6212878 ~ 6222735 (+)
CI01000029_06086495_06092753 NA coding upstream 337676 6086495 ~ 6093859 (+)
CI01000029_06494856_06495812 NA coding downstream 4097 6494391 ~ 6495847 (+)
CI01000029_06724205_06734079 HMBOX1B, HMBOX1 coding downstream 233911 6724205 ~ 6735582 (+)
CI01000029_06775631_06791278 INTS9 coding downstream 285337 6775631 ~ 6791346 (+)
CI01000029_06824397_06831521 CUNH14ORF169 coding downstream 333335 6823629 ~ 6832671 (+)
CI01000029_06834812_06849277 CPSF2 coding downstream 343283 6833577 ~ 6849518 (+)
G155128 NA non-coding upstream 39542 6391776 ~ 6391993 (+)
G155124 NA non-coding upstream 46495 6384764 ~ 6385040 (+)
G155121 NA non-coding upstream 49749 6381467 ~ 6381786 (+)
G155110 NA non-coding upstream 88764 6342548 ~ 6342771 (+)
G155087 NA non-coding upstream 96584 6323091 ~ 6334951 (+)
G155162 NA non-coding downstream 24433 6514727 ~ 6514978 (+)
G155186 NA non-coding downstream 87981 6578275 ~ 6578494 (+)
G155196 NA non-coding downstream 112022 6602316 ~ 6602531 (+)
G155193 NA non-coding downstream 112801 6603095 ~ 6607105 (+)
G155194 NA non-coding downstream 182643 6672937 ~ 6680968 (+)
G155079 NA other upstream 143137 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 961189 5461497 ~ 5470346 (+)
G154587 NA other upstream 1160000 5271020 ~ 5271535 (+)
G153790 NA other upstream 1691428 4733589 ~ 4740107 (+)
G153475 NA other upstream 2869531 3545125 ~ 3562004 (+)
CI01000029_06906861_06907157 NA other downstream 415894 6905834 ~ 6908633 (+)
G155522 NA other downstream 1144539 7634833 ~ 7637834 (+)
G155627 NA other downstream 1441186 7931480 ~ 7932177 (+)
G156007 NA other downstream 2474524 8964818 ~ 9064541 (+)

Expression


Co-expression Network