G156323


Basic Information

Item Value
gene id G156323
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 6786413 ~ 6833696 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU177491
GTCCAAAGCCCTCTAACCCTTCCTGCTAACGCTGCTGTGCTAATAATACACAGAGGAAACTAGCAGAAGGCATCATGGTGAACTTCGCAGCAGCGATTCGTGAGCACTGGGTCAACATTCTGGTCCCTCTGGGTTTCGTCATCGGGGTTTATCTGGACCGACGGAATGATCAGAAACTCACAGCATTCAGGAACAAGAGTGTTTTATACAGCAGGGAACTGAAGCCAGGCGAGCAGTACACCTGGAAGTGAGACTCCTGCAGTGATATTTATTGGACCCTCTGCCCAGAATGTGTATATTGTCTGTTCAGCCACCATGTCTCTGATTTCAAGCATGTTGGTGCAATAAATGTTGCATTTAGTTCTGTAATGCCTTGTAGTTTTTATTTACGGGACGAGTGATGAGACATTTTGTTAGTTTGGTTGGTTTCTCTGTCACATTGCACTGGGTGGCTCCGACCACATTTAATTACATTTTATTAGTCCAAACTCTTGCTCCACATCGCAATCATCATTTAATTAATCAGATAAAATCTGATATAACTGCCTCATTCATTTGGTGTGATTTTGTTGCATCATCTGTGTTAACTAACATATATATAATTATAAAAATATATAATTTTTTAATTTCCCATCATGCTTTACAGGGCCTATTAAGATAATATGACCAAATATCATCTGCAATTACATATTTTTATGCTGTATTTGAATGCAATAGCATGATTTGTCAAGACACCAATACTAAACTGTTTTAATGCTGTTATAGCAACTTTACAGAAATGTTTGTTTTCCCAAAGTTTATGAATGGCCTTGGCAATGGACAACAAACACTGATTAAATATTTTAAGTGTTTGTATAACAATTATGTAAATATATATAGTGGCCAAAAGTGATGTCCAGACTAGGAAAATTGACGTCACCCTTTATTCAAGTATTATTAAAAATGTGTTAAAGATTTTGTAAGCATATTGCGTAGTTGTGCTTGGAGTCAGTTATTTTATTTGTGATAACTCAATGAAACATGACAAATTGTGCAAACAAAAATTTTTGGCCAGGCTGTCATACAAAGAAATTATGAACATGCAAAAACAAGAAAGAACCAGTGAAATATTAATAACTGATTATATTGTAGTTAATGTATGCTTTTTTTTTCTTGTTTTTCTATGCATTTTGTTTTGCATAGTAAAAATAATACATGTAGCTGT
>TU177489
GTCCAAAGCCCTCTAACCCTTCCTGCTAACGCTGCTGTGCTAATAATACACAGAGGAAACTAGCAGAAGGCATCATGGTGAACTTCGCAGCAGCGATTCGTGAGCACTGGGTCAACATTCTGGTCCCTCTGGGTTTCGTCATCGGGGTTTATCTGGACCGACGGAATGATCAGAAACTCACAGCATTCAGGAACAAGAGTGTTTTATACAGCAGGGAACTGAAGCCAGGCGAGCAGTACACCTGGAAGTGAGACTCCTGCAGTGATATTTATTGGACCCTCTGCCCAGAATGTGTATATTGTCTGTTCAGCCACCATGTCTCTGATTTCAAGCATGTTGGTGCAATAAATGTTGCATTTAGTTCTGTAATGCCTTGTAGTTTTTATTTACGGGACGAGTGATGAGACAT
>TU177492
GTCCAAAGCCCTCTAACCCTTCCTGCTAACGCTGCTGTGCTAATAATACACAGAGGAAACTAGCAGAAGGCATCATGGTGAACTTCGCAGCAGCGATTCGTGAGCACTGGGTCAACATTCTGGTCCCTCTGGGTTTCGTCATCGGGGTTTATCTGGACCGACGGAATGATCAGAAACTCACAGCATTCAGGAACAAGAGTGTTTTATACAGCAGGGAACTGAAGCCAGGCGAGCAGTACACCTGGAAGTGAGACTCCTGCAGTGATATTTATTGGACCCTCTGCCCAGAATGTGTATATTGTCTGTTCAGCCACCATGTCTCTGATTTCAAGCATGTTGGTGCAATAAATGTTGCATTTAGTTCTGTAATAAAAAAAAAAAAAAAAAAAGAAAAAAATATATATATTCTCACACAAATAACAAATAATTAACATTTTTAATTGTTTTAAATTTGAATTTGTACTTTTTCACGTGTTATAAATAATTTGAAAACTTTTTTTTACTGTTATTTACTTTACTGGTATTTTATTACTGTTTATTATTGATATGTGTTATTTATTTGTAATTTACAATACTCAAATGTACCTTTGTTGGTTTTTTTCAGTGGTTTTCACTTTCATAGAGTGCATATCGTGACAGATATCATCATCAACCAAAACTTTGAGAATATGGC
>TU177490
GTCCAAAGCCCTCTAACCCTTCCTGCTAACGCTGCTGTGCTAATAATACACAGAGGAAACTAGCAGAAGGCATCATGGTGAACTTCGCAGCAGCGATTCGTGAGCACTGGGTCAACATTCTGGTCCCTCTGGGTTTCGTCATCGGGGTTTATCTGGACCGACGGAATGATCAGAAACTCACAGCATTCAGGAACAAGAGTGTTTTATACAGCAGGGAACTGAAGCCAGGCGAGCAGTACACCTGGAAGTGAGACTCCTGCAGTGATATTTATTGGACCCTCTGCCCAGAATGTGTATATTGTCTGTTCAGCCACCATGTCTCTGATTTCAAGCATGTTGGTGCAATA

Function

GO:

id name namespace
GO:0016071 mRNA metabolic process biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0006397 mRNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0016607 nuclear speck cellular_component
GO:0005681 spliceosomal complex cellular_component
GO:0005685 U1 snRNP cellular_component

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU177491 True 69 lncRNA 0.35 1 6833628 6833696
TU177489 False 69 lncRNA 0.46 1 6833628 6833696
TU177492 False 372 lncRNA 0.36 2 6786413 6833696
TU177490 True 69 lncRNA 0.48 1 6833628 6833696

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location