CI01000030_06712812_06713477 (TMEM186)


Basic Information

Item Value
gene id CI01000030_06712812_06713477
gene name TMEM186
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 6712812 ~ 6713534 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_06712812_06713477.mRNA
ACGATGTCAGCACGCTTAATCCGCATTTCCCGTCTTCCTCTATATGTGTGCCGGTGTCATCATGCAGGGCTCATTTCACAAGCTCACGTGCAATACAGCGGAGACCTGGCACACGCGGGTCGACGGATGCCCATTACAGTCTCACGCACCCTGCAAATTCAACCTGTTTCATTCTGCTCTGACTTTGCATCAAGGAAATACGATCTAATTTATGCTTTTCCGGCTATCAAAGGTCTGCGAGCTCTTTCAAGACTCAAACTGATGCAGACGGGCATCACTGTCGTCTTACTGCCCACTGTGTATTACCTCTACCTGCAGGAACAGGCCTCAGGAATGCTGATGAGTTACACCACAGGTATAGCAGTGTTTGCTGGCGTCATGCTGTACTCCATAAGCCACTATGTCAGAAGAGTGGTTGGCATGATGTATCTGGATTCAACGCAGACCGTCTTAAAGGTGTCACACCTGACCTTCTGGGGTCACAGACGGGACATATACATGCCTGTGTCTGATGTCGTGACTCTGGGAGATTCAGGGGACACCAAAGGAGAACCGATCCTTCGTTTAAAGCGCTACAGCAGTTCTGATACAATGTACTTCTCTACCAGCCTGGGGCGAGTGGTGGACAAAAACGCCTTTGAGAAGGTTTTTGGGAGTTTGTCATGAATTCATGTTTATTTAACGTCATGTTATACGCCACTGGATCTCATTGAAAAGTGACAA

Function

symbol description
tmem186 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in mitochondrion. Orthologous to human TMEM186 (transmembrane protein 186).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_06712812_06713477.mRNA True 723 mRNA 0.48 1 6712812 6713534

Neighbor

gene id symbol gene type direction distance location
CI01000030_06689652_06700195 NA coding upstream 12609 6688824 ~ 6700203 (+)
CI01000030_06658256_06687802 CREBBPA, CREBBP coding upstream 24880 6658256 ~ 6687932 (+)
CI01000030_06605819_06641760 ADCY9 coding upstream 71052 6605819 ~ 6641760 (+)
CI01000030_06595278_06600811 SRL coding upstream 111888 6595278 ~ 6600924 (+)
CI01000030_06515001_06525964 CAPN2L coding upstream 186848 6515001 ~ 6525964 (+)
CI01000030_06807723_06810172 NA coding downstream 94189 6807723 ~ 6810497 (+)
CI01000030_06854630_06884768 NA coding downstream 139378 6852912 ~ 6885095 (+)
CI01000030_07035634_07056907 NA coding downstream 322100 7035634 ~ 7058280 (+)
CI01000030_07090203_07116961 PTPN4B coding downstream 376669 7090203 ~ 7117155 (+)
CI01000030_07132933_07144801 KRT222 coding downstream 419021 7132555 ~ 7144977 (+)
G161262 NA non-coding upstream 141569 6554977 ~ 6571243 (+)
G161265 NA non-coding upstream 143421 6498791 ~ 6569391 (+)
G161271 NA non-coding upstream 158330 6552131 ~ 6554482 (+)
G161257 NA non-coding upstream 215276 6496986 ~ 6497536 (+)
G161256 NA non-coding upstream 216566 6496032 ~ 6496246 (+)
G161293 NA non-coding downstream 7805 6721339 ~ 6721606 (+)
G161295 NA non-coding downstream 11318 6724852 ~ 6725061 (+)
G161344 NA non-coding downstream 92218 6805752 ~ 6806031 (+)
G161345 NA non-coding downstream 92629 6806163 ~ 6806404 (+)
G161266 NA non-coding downstream 97047 6810581 ~ 6819779 (+)
G159816 NA other upstream 2195705 4516778 ~ 4517381 (+)
G159685 NA other upstream 2224286 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 3669039 3018776 ~ 3043773 (+)
G158416 NA other upstream 4098519 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 4430442 2277208 ~ 2282743 (+)
CI01000030_07200104_07202258 GCGA other downstream 486401 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 1140551 7868292 ~ 7886228 (+)
G162088 NA other downstream 1524431 8237965 ~ 8239604 (+)
G161986 NA other downstream 1831048 8544582 ~ 8548325 (+)
G162137 NA other downstream 1854476 8568010 ~ 8571726 (+)

Expression


Co-expression Network