CI01000030_08845484_08861801


Basic Information

Item Value
gene id CI01000030_08845484_08861801
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 8845484 ~ 8861801 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_08845484_08861801.mRNA
ATGAAGAACTTTATAGTGATACTTTTGTTGACATTTTTAAGGGACGGTGTGTTTGGTGCTGATGAAATGAAGAAAGAAGTGACAGAGGGAAATTCTTTGACTCTACCGACTGCTCTTACTAAAACACAGAGTAGCGATCAGATATTTTGGCTGTATGGACCTCAGAAAACCATCATAGCTAAAATTGCAAGAGGAATTTACGAGACTGGTGGTGATGAGAGATTTGAAGGCAATCTGGAGCTGGACAAACAGACTGGATCTCTCACCATCAAAAACATCAGAATAATAAACACTGGACTTTATCAGCTCGACTTCAACGGAGCCGTATCCAGGGAATTCAGTGTAACAGTCTATGCTCGACTGCCCACACCTGAAATTCTCTCTCCACAATGTGCTCAAACACCAGCTGGGTCATCAAGCCCAAAATGTGTCTTTCAGTGTTCTGTGCAAACATCAGACCAGGTGACTCTCTCTTGGTATAAAGGAAACAGTTTAGTCTCCAGTAACATCTCTAATATTTGCAGCAGAATCTCTTTACCCCTGGAGGTAAATTATGAGGATAAAAACCCCTACAGCTGCATGGTGAACAATCCCATCAGCAACAAGACTAAACACCTGGACATCACCCAACTCTGTCACAGATGTGATGGTTCAGGTCTGTCTCCATGGAGTGTAGTAGGGATATCAATTGGTGTTTTTCTGGTGGTGGTGCTTGCAGCTGCTGGTCTTTACAATCACTTTAAACCAGAAATGCAAATAGGTTCAATTATACCTGAGACTGTTAAATGTGTGGAGGGAACATTTGCTTCCCTACCCTCTGGTGTTGTTGAAGTAAGGAGTGGTGATCAGATGCTGTGGACGTTTGAAAATGAAAAGTCTCCTATAGCTACAATGAGTAAAAATGACAAGAAGACCTATTTCTATGATGATAAGAGATTCAGAGGCAGACTGCAGCTGGATCATCAGACTGGATCGCTGATCATCAGAAACCTCAGAAAAACAGACTCTGGAGTTTATCTTCTACAGATCAAAAGCACAGGAGGGACCACATACAGAAAATATAAAGTTATTCTCAATGGTAAAGTGGAGACGGTGTCAGTGAAGGAGGGAAGTGATGTCACTCTACCATTTGTTTATCCGATAAAGGATGTGGATCATTTAAAGTGGCAGTTTGGAGAGGAGAGGAGTTTCATAGCTTTGTTAATAAAAGAAGACAATGAACTCAAGTATTCTGGTGAGAGATTCATAGACAGACTGGACCTGGACAAACAGACTGGATCTCTGACCATTAAGAACATCAGACCTGAACACACTGGAATTTATACAGTAAAAATAAGTTCACTTATTTTAAAAGACACATTTAATGTTATTTTTGATGGTGTGTTCAGAGATGAAAAGGATGAAATGAAGACTCTGACAGTGGAGGAGGGAGGTGTTCTCATTCTAAACACTGATACTCGAATACAGACAGATGATGAGATACTCTTGAGGTTTGGAACATCTTTTGCGAAAAGACGCCCATATGTTACCATAGCTAGATTCAGTAAACAGGATGAATTTAAATCTTCGGAGAGGGGATTTAAAGAAAGACTGCAGCTGGATCGCACTGGACCTCTCACCATCACCATCAAAAACATCAAATTCACAGATTATGGAGATTATTAT

Function

NR:

description
Si:ch211-222k6.3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_08845484_08861801.mRNA True 1665 mRNA 0.41 7 8845484 8861801

Neighbor

gene id symbol gene type direction distance location
CI01000030_08837486_08838040 NA coding upstream 7033 8837221 ~ 8838451 (+)
CI01000030_08763819_08775586 NA coding upstream 69712 8763730 ~ 8775772 (+)
CI01000030_08555726_08559327 MMYHEMB1 coding upstream 286087 8555379 ~ 8559397 (+)
CI01000030_08168074_08174577 NA coding upstream 670822 8167927 ~ 8174662 (+)
CI01000030_08159242_08166884 GLS2B coding upstream 678539 8159242 ~ 8166945 (+)
CI01000030_08862264_08875155 NA coding downstream 463 8862264 ~ 8875155 (+)
CI01000030_08875265_08877569 NA coding downstream 13464 8875265 ~ 8877569 (+)
CI01000030_08889890_08899808 NA coding downstream 28089 8889890 ~ 8900680 (+)
CI01000030_08906500_08914084 NA coding downstream 44699 8906500 ~ 8914084 (+)
CI01000030_08951137_08953545 NA coding downstream 88177 8949978 ~ 8953663 (+)
G162236 NA non-coding upstream 34029 8809324 ~ 8811455 (+)
G162233 NA non-coding upstream 38307 8806668 ~ 8807177 (+)
G162232 NA non-coding upstream 39526 8805494 ~ 8805958 (+)
G162192 NA non-coding upstream 41692 8801247 ~ 8803792 (+)
G162230 NA non-coding upstream 44919 8800276 ~ 8800565 (+)
G162186 NA non-coding downstream 3374 8865175 ~ 8930522 (+)
G162254 NA non-coding downstream 84321 8946122 ~ 8946337 (+)
G162255 NA non-coding downstream 84757 8946558 ~ 8947698 (+)
G162256 NA non-coding downstream 86057 8947858 ~ 8948340 (+)
G162257 NA non-coding downstream 87663 8949464 ~ 8949693 (+)
G162137 NA other upstream 273758 8568010 ~ 8571726 (+)
G161986 NA other upstream 297159 8544582 ~ 8548325 (+)
G162088 NA other upstream 605880 8237965 ~ 8239604 (+)
CI01000030_07868597_07886123 NA other upstream 972712 7868292 ~ 7886228 (+)
CI01000030_07200104_07202258 GCGA other upstream 1642999 7200104 ~ 7202485 (+)
G162449 NA other downstream 494602 9356403 ~ 9357014 (+)
CI01000030_10039688_10047019 NA other downstream 1180992 10039358 ~ 10047210 (+)
G162297 NA other downstream 1271498 10133299 ~ 10221224 (+)
CI01000030_10473378_10509560 NA other downstream 1629645 10471835 ~ 10511071 (+)
CI01000030_10738658_10751094 NA other downstream 1876780 10738087 ~ 10751548 (+)

Expression


Co-expression Network