G158436


Basic Information

Item Value
gene id G158436
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2652644 ~ 2653106 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU179906
GGGGTAGGATAATCTCACAAATACTGGTGCTGCTTAAATGGGAAGAATGTTCAAAACAAGAATGTACATGTAAAATTTTTAACAAAGACAAGTACACATCATAACGGAATCATAAGTTTAAAAAAGGAGTCAACCAAGTAATTAATGGAATTCTCAGAAGTCTCTTAATTTTTTCCCTCCGGTGAAAGTAATTTCTACCTGACACTCAAGAGGATTGGATCTAGGAGGGTATAATTATGGCAAGTTACAATCGTAAACATTTATTACGGCCCTAGAGAGAAACACATTAACATCTCTGGAGTACTAACAATTATGAACCTAAAACTAAGACTAATTAAGCTGCTAAAAAAAACAGTCGACTAAATGAACTGTCTGTGACCTCATTTTCCCTGAGTTTAATAAATCTTACATATAAATATTGCCAATTTACATTTTAAGATATTCATAACATTTAAAATAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU179906 True 463 lncRNA 0.32 1 2652644 2653106

Neighbor

gene id symbol gene type direction distance location
CI01000030_02641511_02650047 CILP2 coding upstream 2105 2641045 ~ 2650539 (+)
CI01000030_02620111_02632697 YJEFN3 coding upstream 19922 2620111 ~ 2632722 (+)
CI01000030_02573116_02582804 GATAD2A coding upstream 69832 2573116 ~ 2582812 (+)
CI01000030_02531026_02532411 NA coding upstream 118412 2530509 ~ 2534232 (+)
CI01000030_02472528_02477483 NA coding upstream 175161 2472528 ~ 2477483 (+)
CI01000030_02678940_02684491 NA coding downstream 25834 2678940 ~ 2684591 (+)
CI01000030_02705058_02731134 NA coding downstream 48705 2701811 ~ 2731151 (+)
CI01000030_02843446_02856037 CBARPB coding downstream 190340 2843446 ~ 2856216 (+)
CI01000030_02891265_02897170 FSTL3 coding downstream 238005 2891111 ~ 2898442 (+)
CI01000030_02911153_02916952 NA coding downstream 256294 2909400 ~ 2916952 (+)
G158555 NA non-coding upstream 205192 2447009 ~ 2447452 (+)
G158548 NA non-coding upstream 225869 2426494 ~ 2426775 (+)
CI01000030_02423347_02426071 NA non-coding upstream 227569 2422768 ~ 2426301 (+)
G158508 NA non-coding upstream 340174 2304497 ~ 2312470 (+)
G158434 NA non-coding downstream 2169 2655275 ~ 2655548 (+)
G158566 NA non-coding downstream 3867 2656973 ~ 2657187 (+)
G158567 NA non-coding downstream 5156 2658262 ~ 2658521 (+)
G158398 NA non-coding downstream 34437 2687543 ~ 2690341 (+)
G158416 NA other upstream 38351 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 370274 2277208 ~ 2282743 (+)
G157726 NA other upstream 1014417 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1645957 1003114 ~ 1003795 (+)
G157227 NA other upstream 2296161 327649 ~ 356483 (+)
CI01000030_03018776_03042194 FGF22 other downstream 360350 3018776 ~ 3043773 (+)
G159685 NA other downstream 1778694 4431800 ~ 4488526 (+)
G159816 NA other downstream 1863672 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4546829 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 5200979 7868292 ~ 7886228 (+)

Expression


Co-expression Network