XLOC_008895


Basic Information

Item Value
gene id XLOC_008895
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 837015 ~ 848792 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019102
tgtgaatcctcatatggTCTGTAAGGTATTGTTTCCAagaaaaactctttccacactgttggcaattgtaaggcttttctccagtgtgaatcctcacaTGGGTTGCAAGGTTTTGTTTCCAAGTGAAACTTTTTCCACAATGTAGGCAGATATTATGCTTTTCTCCATTGTGCATCCTCATATGGTCTGAAAGGTTTTGTTTCcgagtgaaactctttccacactgtggGCAAGTATGTCGCCTTTCTCCAGTGTGCATCATCATATGGCCTATAAGGTGTTGTTTAAAAgtgaaactctttccacattgttggcaag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019102 True 318 lncRNA 0.41 2 837015 848792

Neighbor

gene id symbol gene type direction distance location
XLOC_008893 NA coding downstream 21996 813096 ~ 815019 (-)
XLOC_008892 im:7143333 coding downstream 91343 742198 ~ 745672 (-)
XLOC_008891 si:dkey-7i4.19 coding downstream 97786 736522 ~ 739229 (-)
XLOC_008889 zgc:174574 coding downstream 132550 685007 ~ 704465 (-)
XLOC_008888 zgc:171901 coding downstream 152104 672984 ~ 684911 (-)
XLOC_008896 NA coding upstream 21169 869961 ~ 909037 (-)
XLOC_008897 NA coding upstream 26536 875328 ~ 875985 (-)
XLOC_008898 NA coding upstream 28412 877204 ~ 908307 (-)
XLOC_008899 NA coding upstream 50297 899089 ~ 900879 (-)
XLOC_008900 si:dkey-77f5.14 coding upstream 71506 920298 ~ 923981 (-)
XLOC_008885 NA non-coding downstream 203607 622709 ~ 633408 (-)
XLOC_008874 NA non-coding downstream 407368 428419 ~ 429647 (-)
XLOC_008873 CABZ01056628.1 non-coding downstream 411259 425695 ~ 425756 (-)
XLOC_008871 NA non-coding downstream 458828 374380 ~ 378187 (-)
XLOC_008902 NA non-coding upstream 137352 986144 ~ 993587 (-)

Expression


Co-expression Network