XLOC_008896



Basic Information


Item Value
gene id XLOC_008896
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 869961 ~ 909037 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00019103
TGAGTTTACAGGCTTTGGAGAAACATTCTACAGCAACTATAACAGACATAAAACCATCAGAGTTATGGAAGTCAGAAACACTGTCAATACCAATACGGGATCAGAGTCATCGTGGAATGAGTAATGGAATGAGTTTACCACCAGGCAAACATCTGGGTGTCTTTGACATGGCACAGACTGAGCAGTGACATGAGGATGAAGATTGTGTTTGTGATTGATAATGTCATAACTTTGCTCTACCGGGGAGTTTCCTGGACAAGTGAAGTGAGTGAAGAGGTAATATAATAAGACTGTGGATGGATTGTAGGTAGAAATTGGCAAAGCCCATGAAGCATTGTAG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00019103 True 340 lncRNA 0.41 3 869961 909037

Neighbor


gene id symbol gene type direction distance location
XLOC_008895 NA coding downstream 21169 837015 ~ 848792 (-)
XLOC_008894 NA coding downstream 21499 818191 ~ 848462 (-)
XLOC_008893 NA coding downstream 54942 813096 ~ 815019 (-)
XLOC_008892 im:7143333 coding downstream 124289 742198 ~ 745672 (-)
XLOC_008891 si:dkey-7i4.19 coding downstream 130732 736522 ~ 739229 (-)
XLOC_008900 si:dkey-77f5.14 coding upstream 11261 920298 ~ 923981 (-)
XLOC_008901 alox5b.1 coding upstream 33494 942531 ~ 952891 (-)
XLOC_008902 NA coding upstream 77107 986144 ~ 993587 (-)
XLOC_008903 NA coding upstream 98563 1007600 ~ 1008359 (-)
XLOC_008904 znf1010 coding upstream 108400 1017437 ~ 1022436 (-)
XLOC_008885 NA non-coding downstream 236553 622709 ~ 633408 (-)
XLOC_008874 NA non-coding downstream 440314 428419 ~ 429647 (-)
XLOC_008908 NA non-coding upstream 231408 1140445 ~ 1143069 (-)
XLOC_008910 LO017713.1 non-coding upstream 412753 1321790 ~ 1321906 (-)
XLOC_008927 AL954387.2 non-coding upstream 1356932 2265969 ~ 2266083 (-)

Expression



Co-expression Network