XLOC_008897



Basic Information


Item Value
gene id XLOC_008897
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 875328 ~ 875985 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00019104
TTTCCTagcaaaactctttccacaatgtTGGCAATTGaatggcttttctccagtgtgcatCCTCACATGGTCTGTAAGGTGTTGTTTACAAGTGAAACTCTTTTCACAATGTTGGCAATTGaatggcttttctccagtgtgaatcctcatatggAATGTAAGGTTTTGTTTCCAAGTGAAACTTTTTTCACACTTTTGGCAAGTGTAAAGCTTTTCTCCATTATGAATCTTCATATGCTCTTTTAAGTTTTCGCTCCgattaaaactctttccacattgcTGGCAAGTgtaaggcttttctccagtgtgaatcctcatatggaatgtaaggttttgtttccaagtgaaactttttccacactgGTGGCAAGTATTAGATTCGGCTGTTGTTTGTGATGAGGTTTTTGTCTGTTCTGATTTTTCTCCAGAACTGAAATCCAGACATTCCTCATGCTGATCCTTCTCTTCTACTTCATTCTGATCTTGACTC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00019104 True 490 lncRNA 0.38 2 875328 875985

Neighbor


gene id symbol gene type direction distance location
XLOC_008895 NA coding downstream 26536 837015 ~ 848792 (-)
XLOC_008894 NA coding downstream 26866 818191 ~ 848462 (-)
XLOC_008893 NA coding downstream 60309 813096 ~ 815019 (-)
XLOC_008892 im:7143333 coding downstream 129656 742198 ~ 745672 (-)
XLOC_008891 si:dkey-7i4.19 coding downstream 136099 736522 ~ 739229 (-)
XLOC_008898 NA coding upstream 1219 877204 ~ 908307 (-)
XLOC_008899 NA coding upstream 23104 899089 ~ 900879 (-)
XLOC_008900 si:dkey-77f5.14 coding upstream 44313 920298 ~ 923981 (-)
XLOC_008901 alox5b.1 coding upstream 66546 942531 ~ 952891 (-)
XLOC_008902 NA coding upstream 110159 986144 ~ 993587 (-)
XLOC_008885 NA non-coding downstream 241920 622709 ~ 633408 (-)
XLOC_008874 NA non-coding downstream 445681 428419 ~ 429647 (-)
XLOC_008903 NA non-coding upstream 131615 1007600 ~ 1008359 (-)
XLOC_008908 NA non-coding upstream 264460 1140445 ~ 1143069 (-)

Expression



Co-expression Network