XLOC_008948 (mlnr)


Basic Information

Item Value
gene id XLOC_008948
gene name mlnr
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 2976120 ~ 2985599 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017665
ATGACCATCCTGATCATCCAGCGCTTTAAGGACATGAAGACCACCACCAACCTGTATCTCTCCAGCATGGCCATCTCAGACCTGGTCATCTTCCTCAGCCTGCCCTTCGACCTCTACCGCCTCTGGAAGTACGTCCCTTGGATCTTCGGCGAGTTTGTGTGTCGTCTGTCGCACTACATCAATGAAGGATGCACCAACGCCACCATCCTTCACATCACGGTGCTCAGCATGGAGCGTTACCTGGCCATCTGCTTCCCTTTCAAAGCCAAGGCGGCCATTACTAAGAGGAGGGTCAAATACGTGATCTTGGCTCTGTGGGGTTTTGCTCTTCTGTCCGCGGCGCCGATGTTCTTCTTGATGGGGGTGGAGTATGAAAATGAAACCATGCCTGATCCCGGGTCTCGACAGTGCAAACACACACGATACGCCATCGAGTCAGGGCTGCTACACACCACGATTTGGGTTTCAACTGCCTACTTCTTCTGCCCCATGTTTTGCTTGCTCTTCTTGTACGGATCCATCGGCCGAAAGTTGTGGAAGAGTCGGCATGAGCTTCATGGACCCAATGCGGCAGCCAGACAGAAGGTTAACAGGCAGACCGTCAAGATTCTGGctgtTGTGGTATCAGTCTTTGCCATCTGCTGGCTGCCGTACCACATCGGCCGCTTCCTCTTCACTCATGTGGATGACTATCACTccgctcggctcagtcagaactTCAACGTGGCCTCGATGGTGCTCTTCTACCTGAGCGCATCAGTCAATCCAGTCCTCTACAACCTGATGTCCAACAAATACCGCTCCGCCGTCAAACGTCTCTTCCTGCTGCCCCGCGGGCCACAttgggctcacattcagattacattttgccacaagtgccaaatctttgccttaaaaggcccatatatgaatttgaatctttag

Function

symbol description
mlnr Predicted to enable G protein-coupled peptide receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in brain; gill; heart; liver; and pleuroperitoneal region. Orthologous to human MLNR (motilin receptor).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008528 G protein-coupled peptide receptor activity molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04030 G protein-coupled receptors

ZFIN:

id description
ZDB-GENE-130530-1015 Predicted to enable G protein-coupled peptide receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Is expressed in brain; gill; heart; liver; and pleuroperitoneal region. Orthologous to human MLNR (motilin receptor).

Ensembl:

ensembl_id ENSDARG00000091207

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017665 True 924 mRNA 0.52 3 2976120 2985599

Neighbor

gene id symbol gene type direction distance location
XLOC_008947 zgc:153184 coding downstream 2752 2931882 ~ 2973368 (-)
XLOC_008946 CABZ01086029.1 coding downstream 45099 2918257 ~ 2931021 (-)
XLOC_008945 guca1c coding downstream 72645 2884711 ~ 2903475 (-)
XLOC_008944 ankrd49 coding downstream 118159 2850965 ~ 2857961 (-)
XLOC_008943 CABZ01086041.1 coding downstream 134443 2820768 ~ 2841677 (-)
XLOC_008949 fndc3a coding upstream 1994 2987593 ~ 3078600 (-)
XLOC_008950 slitrk5a coding upstream 103613 3089212 ~ 3096150 (-)
XLOC_008951 NA coding upstream 129738 3115337 ~ 3116262 (-)
XLOC_008952 NA coding upstream 174839 3160438 ~ 3162459 (-)
XLOC_008953 stoml3a coding upstream 260724 3246323 ~ 3252727 (-)
XLOC_008942 NA non-coding downstream 159978 2813516 ~ 2816142 (-)
XLOC_008940 CABZ01086049.1 non-coding downstream 239622 2736383 ~ 2736498 (-)
XLOC_008933 NA non-coding downstream 350192 2618279 ~ 2625928 (-)
XLOC_008932 NA non-coding downstream 364950 2598804 ~ 2611170 (-)
XLOC_008957 NA non-coding upstream 768967 3754566 ~ 3760957 (-)
XLOC_008970 NA non-coding upstream 1177979 4163578 ~ 4174873 (-)
XLOC_008973 CU467614.1 non-coding upstream 1379559 4365158 ~ 4365272 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000092_00156990_00162891 MLNR coding CI01000092 null 156990 ~ 162891 (-)
bowfin (Amia calva) AMCG00021408 NA coding CM030130.1 CM030130.1 16653440 ~ 16655886 (+)