XLOC_008966 (CR626884.2)


Basic Information

Item Value
gene id XLOC_008966
gene name CR626884.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 4062000 ~ 4067158 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017686
GTGCCAGCTTCCACATCCAGCTCAATCATGGACCAGAACGCAACCAATTCAACCGAAGAACACTGTGGCTTGTCTGAAATGCCAGCTCGTCTATTTTTCATAACTGTATACACAGTCATTTTTGTGGCCAGCCTAATGCTCAACAGCATTGccatttatgtgtatttttttaaagttacaactCAGTCCAGCATCACAGTGTATCTGAAGAATCTGGCAATAGCGGATTTGTTTGTCTGCCTGTGTCTGATATTACGCATTGTTAAGTATGCTAGTGCTTCTGTGGGAATTCAAAGTATCTACTGTAAGTTCGGAGCTCCAGCTTCTTACCTCAACATGTACTCCAGTATTCTCTTCATGGGCTACATTGCTGCAAACAGATATATGAGAATTGTGCGGCCACTGGAGACTCACAGGTTACAAACTGTCACCTCGACCCGTTACATCTGCGCTGTGACCTGGGCTGCCATGCTTGGATGTAATTCGATCTACATTGCTGCTTTCATCATTACTGATAAAGAACACCCTGCCGACAGTGGTTTTGACTGTGAAAGCTTTCATAGCAACTTGGTCAAACAGATCCACCTGGTCCTGCAGATCACTTCCTTTTTAGGCTTTTTGTGTGTGCTGGTGTCCCTCATTCTGTTTTATTGGTGGAACGTACAGAAGCTTCAGCAAGCTCAACGCACTATGCCGGAGCAGCCTGGTAACAAAAAGCTTAGCAAATCCAAACGAAACATGCAAGTTCTAGTGGTCATTTTCTGTGTGTGCTTTGTGCCTTATCACCTGATAAGACTGCCATATGTGTTGCTCAATCCCCTGCTGCATGACTGCACCACAGCTCAGGTTTTCCACATCCTAAAAGAGCTGACTGTTCTGCTTGCAGTACTTAACGCCTCTTTGGATCCGTTAATTTACTTTGCATTTTGCAAGACCTTCAGGAGCCATCTTAATCTCCAAAGATTTTACAGATCCGAATAGGAACTGATACCATCAGTGATGTCAGTTTTGCTCTGCAAATGCAGAATGCCACCTAATTTGATGATGTTGAGTGAAGACTCTGTGTCATTTTCACCACTAGGGGGAGCATATACGCACAACCAACATAAGTGCATATTGATGATGCTGTGACAgtatggaatcatgggagttgatGTTCATCCTAtccttatcaaacacagctgatccaactaatcacaGTGTTCAAGATTACTGGAGACTATTACGCAGGTGTGAGTTCGAGGTGGatggagataaactatgcagagctgtcgcccttcaggaattgagtttaagccattgcttttaaaaccttttttctccattacatctttaaaaaatatcaCATCTCTGCTGATCTAGTGTAGAGCTGAATAGTATGTTGCTGTTGCATTAATAGAAACAAAATGAAGCCTTTAGCAAATGTAGACAGGTGGTGCTGGGGGAGGTGGAGGGTTTCAGGGGAACCAACTGCTGGAGCAGCTTGCAGCAAATGATGATTTCGCAATGTTGATGTTGCCATGCCATTAAGCCACTGTCAACAGAAACTCTCAATGCTTGTTCTACCTCTGAGATCTTCAAAAGTCACTGATTGGTCCCCTGCTTTGGACTGACAGTGATGAGCGCCACTATGTGTAAaagttgaaaaaattaaaaaagtctTGGTGCGAGgctctgaaaaagagaaaaagatgTGAGTGTATAATGGgtcacacatacagttgaagtcagaattattggcccccctgaattaatagcgcccctgttcccccccccccccctcccccaatt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100595

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017686 True 1791 mRNA 0.44 2 4062000 4067158

Neighbor

gene id symbol gene type direction distance location
XLOC_008965 CR626884.5 coding downstream 8851 4049222 ~ 4053149 (-)
XLOC_008964 P2RY14 coding downstream 24374 4036709 ~ 4037626 (-)
XLOC_008963 CR626884.6 coding downstream 34633 4018362 ~ 4027367 (-)
XLOC_008962 CR626884.4 coding downstream 50987 4009572 ~ 4011013 (-)
XLOC_008961 si:ch73-309g22.1 coding downstream 85965 3970797 ~ 3976035 (-)
XLOC_008967 si:dkey-83h2.3 coding upstream 18465 4085623 ~ 4094888 (-)
XLOC_008968 rnf168 coding upstream 34096 4101254 ~ 4124099 (-)
XLOC_008969 ANO7 coding upstream 61402 4128560 ~ 4152582 (-)
XLOC_008970 NA coding upstream 96420 4163578 ~ 4174873 (-)
XLOC_008971 ece2b coding upstream 105130 4172288 ~ 4314097 (-)
XLOC_008957 NA non-coding downstream 301043 3754566 ~ 3760957 (-)
XLOC_008952 NA non-coding downstream 899541 3160438 ~ 3162459 (-)
XLOC_008951 NA non-coding downstream 945738 3115337 ~ 3116262 (-)
XLOC_008946 CABZ01086029.1 non-coding downstream 1130979 2918257 ~ 2931021 (-)
XLOC_008942 NA non-coding downstream 1245858 2813516 ~ 2816142 (-)
XLOC_008973 CU467614.1 non-coding upstream 298000 4365158 ~ 4365272 (-)
XLOC_008997 FO704791.1 non-coding upstream 1315904 5383062 ~ 5383180 (-)
XLOC_009008 NA non-coding upstream 1831252 5898410 ~ 5901982 (-)
XLOC_009014 NA non-coding upstream 2901223 6968381 ~ 6976921 (-)

Expression


Co-expression Network