XLOC_008983 (or126-3)



Basic Information


Item Value
gene id XLOC_008983
gene name or126-3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 5182854 ~ 5184186 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00017718
TTTGTAAATCATTGTATGCTGCTGATAGTTGATGTTTTTGTCGGTATTTGTTGTTCATCTACAGATTTCCAACCGTGGCATTTCAGACTAACGCAAGCTTCATTGTCTAATCAGTTTTCTAATAACTTTAATTACGAATTAACTTCAGATAACAACTGCATATTTTGAAACATGCAGTCACCATTGAAGAATGaatcaaatgtatttgtatttgcaCTCTCTGGTCTGAATGAAACAATGGAGAACAGATATGTTTTGTTATCTTTCACGGCATTGTTTTATCCTGTGGTTATCTTTTGTAATGTAACAGTGATTTTGACTATTTTCTTACATAAGAAGCTCCATGAGCCAATGTATATCTTTTTATGTAATCTTTGTATAAATGGAATTTTCGGCACTTCAGGCTTCTACCCTAAGTTCATGTATGATTTATTAGCCCCTGAGCATGTGATTTCTTACGCTGGCTGTCTGATTcaaatatttgtcatttattcatcGGTTTTTTGTGACTTTTCCACACTAACCGTGATGGCGTATGATAGGTATGTGGCAATATGTAGACCACTGGAGTATCATTCAATGATGACCAATCAAAAAATACTTAAATGTGTTCTTTTCTGTTGGCTGTCTCCATTTTTCTGCATGGCTGTTCTCATTCTGTTAATAGCTAGACTCACTTTATGTGGCTTTCGAATTGAAAAGTTATACTGTGAGATTTGGGGAGTTGCAAAGCTTTCATGTTTTTCCACGACTCTAAATAACGTGTTTGGGTACATCGTTATCATTGCATATGTTGGACATGCAATATTGATATTTTGTTCATACATTTACTTGATTAGAAAGTGTCAGAAGTCAATAGAGAGCAGGCACAAGTTCATGCAGACATGTGTGCCACATATGATTTCGTTGCTCAACGTGACTGTTGCTTTTTTGTTTGATGTACTCTTCAGTCGTTATGGGTCAAAGAATGTGTCTCAAAATCTACGCAATTTCATGGCTCTTGAATTCATACTCATTCCACCCTTTTTAAATCCTCTCATTTATGGGTTAAATCTCACCGCAGTACGCCAGGAAGTTATACGATTGTTTTCCAGAAAACAACTGGAGATATCTAAGTGAATATTCAAAAGGAAAGTCTTGTATGCTTTTATATTGTATGCTTGTTctttatcaaaaataataatagtaaatgaaTTACTGAGAACACAAAACATTGAGGAACAAAGGACTGAATATTACAAAGATTTTACTGTGATGAAGATGTATTCAAGGACATGAATTTaagcagttaaactctgctgttattttgggatttttgccaacccaaatttaa

Function


GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0050896 response to stimulus biological_process
GO:0007608 sensory perception of smell biological_process
GO:0007165 signal transduction biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function
GO:0004984 olfactory receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-070806-101 Predicted to enable odorant binding activity and olfactory receptor activity. Predicted to be involved in detection of chemical stimulus involved in sensory perception of smell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane.

Ensembl:

ensembl_id ENSDARG00000105833

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00017718 True 1333 mRNA 0.34 1 5182854 5184186

Neighbor


gene id symbol gene type direction distance location
XLOC_008982 or126-4 coding downstream 3955 5175593 ~ 5178899 (-)
XLOC_008981 or126-5 coding downstream 10684 5167690 ~ 5172170 (-)
XLOC_008980 or126-7 coding downstream 17841 5162274 ~ 5165013 (-)
XLOC_008979 or128-10 coding downstream 25282 5155137 ~ 5157572 (-)
XLOC_008978 defbl3 coding downstream 166815 5011080 ~ 5016039 (-)
XLOC_008984 or126-2 coding upstream 5222 5189408 ~ 5191672 (-)
XLOC_008985 or128-9 coding upstream 12529 5196715 ~ 5198191 (-)
XLOC_008986 or128-8 coding upstream 17868 5202054 ~ 5203371 (-)
XLOC_008987 or128-7 coding upstream 21352 5205538 ~ 5207805 (-)
XLOC_008988 or128-6 coding upstream 26282 5210468 ~ 5212930 (-)
XLOC_008973 CU467614.1 non-coding downstream 817582 4365158 ~ 4365272 (-)
XLOC_008970 NA non-coding downstream 1007981 4163578 ~ 4174873 (-)
XLOC_008957 NA non-coding downstream 1421897 3754566 ~ 3760957 (-)
XLOC_008952 NA non-coding downstream 2020395 3160438 ~ 3162459 (-)
XLOC_008951 NA non-coding downstream 2066592 3115337 ~ 3116262 (-)
XLOC_008997 FO704791.1 non-coding upstream 198876 5383062 ~ 5383180 (-)
XLOC_009008 NA non-coding upstream 714224 5898410 ~ 5901982 (-)
XLOC_009014 NA non-coding upstream 1784195 6968381 ~ 6976921 (-)
XLOC_009015 CR396585.2 non-coding upstream 1824636 7008822 ~ 7008938 (-)
XLOC_009016 CR396585.1 non-coding upstream 1847911 7032097 ~ 7034722 (-)

Expression



Co-expression Network