CI01000033_01792241_01801250 (AATKA)


Basic Information

Item Value
gene id CI01000033_01792241_01801250
gene name AATKA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000033
NCBI id null
chromosome length 1934898
location 1792215 ~ 1801271 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000033_01792241_01801250.mRNA
AGAGATAGTTGTGTGTCAGGAATGGGGGGGTGGCGTGGGGGGGTCATTGCTGTGACAATCCTGGCTCTGAGCAGCAGAGAATGGGCCTTGTGTCTGGGCTGGTACTGGGGTACCAGGCGCTGCTGCTCTGCGGACAAAAGCCACAATGTAACTGTGGCGGGGAGTGCGAGGGGCTGGAATGAGAAGCTTCTGGAACGCTGCAGAGGAGGAGAACAGTTTAGTGCATTAATACAGGGATGGGTCTCTAGAGCTGCTAGTTTTTACCACAGCTTCAAGATGAGTTGGCTCCAGCTGAGAGTTCCAGCCGGGTGCATTATGGGAATGTTGTGGAACGCCATATCTCAGCACGAGGAGACGAGCTCTTTCTCTGGGAAGGAAGAAAGACAGCGCTGCTTTCTCAGCTGTCAGAGGGCTTGGAGGGTTAAACCCCTGGAGCTTGGACGGAGACATGGAGAACCGGAGAAGAACGGCAACTCCATTCCACAGCGTTGTCGGACCTTCATCCTAAGGTTTCCTGCCAGACAAAGAGAGCTGCTCTTCGTCGCTGTATCTTATCTGCTGAATTATGATGTTCAGCTCCTGAAGCCTACAGATCTCGGACGCCACAGCCTCCTCTACATAAAAGAAATGGGACATGGCTGGTTTGGCAAGGTTTTGCTGGGGGAGGTGAATGCTGGACTCAGCACCACACAGGTGGTGGTTAAGGAGCTGAAGGCCAGTGCCAGTGTACAGGAGCAGATGCAGTTCCTGGAAGAGGTCCAGCCTTACCGGGTGCTCCAGCATCCAGCCCTCCTGCAGTGTCTATCCCAGTGTTCAGAAGTCACGCCCTACCTGCTGGTTATGGAGCACTGTCCCCTGGGAGATGTTAAAGGATACCTACGTAGCTGTCGGGCCACAGACTCCATGACCCCTGACCCTTTGATCCTTCAGCGGATGGCATGCGAGATTGCTTCTGGTCTTCTGTACCTTCACAAACACAATTACATTCACAGTGACCTGGCTCTTAGGAACTGCCTGTTGACCTCAGAGCTGGCAGTGAAAATTGGAGACTATGGCCTCAGCCACAGTAAGTACAAGGATGACTATTATGTAACAGCAGATCAAATATGGGTTCCTCTACGCTGGATTGCCCCAGAACTTATTGACGAAGTCCACGGCAATCTCTTAGTCGTGGACCAAACCAAGGCCAGCAATGTCTGGTCACTAGGTGTGACAATATGGGAGTTGTTTGAACTGGGGAACCAGCCTTACAGGCACTATTCTGATAGGCAGGTTTTAACATATGCTGTAAAGGAACAGCAGCTCAAACTGCCAAAGCCGCTGTTGAAAGTGCCTCTGTGTGAACGCTGGTATGAGGTAATGCAGTTCTGTTGGCTGCAGCCTGAGCAGAGACCTGTCGTGGAGGAAGTCCATCTACTGCTAAGTTATCTGTGTGCTAAGGGTGCCACTGAGGCTGAGGAGGACTTTGAGCAGCGCTGGAACTCTCTCAGGCCAAGTCTGGGCTCCAACAACTCTCACAGGACACCTGCACCTGAAGTAGCTTCTTCTACTTCCTCTTCATTTCCTCTACTTGAACACTTCTCTATGGCAGACAGCTTCCAGTCTGAGAATGGGGACGACATATTGACAGTAACTGAGACCAGCCATGGGCTCAACTTTGAGTATAAATGGGAGCAGGCACGAGCAGAGCAGCCCTACTGCTCCTCTTCAGCTAGTGGACCATTGGGAAAGAATAATCCCCATTACCAGGATGTGTATTACCCTCTTAGCAACTCCACAGGTAGCTGCAAGAGTGAGAGCCTCCCTCTCGGGGTCTCTCCATCCTACTATGAGTCAGACCATCCAGGGGTGGTTCCAGTGCTGAGTGCACACAGCCCCTCAGTAAGTAGTGAGTACTACATCCGCATTGAGGAACCAGTTGAGTGCAACATCAACTTAGAAGACACCAATCTTGATTACAGCCCAAGAGTTGAAGCCAGCAACAGTAACTTGTCGTCTACGGACAGGAGAAGCCCCATTGGGTCTCAGCCAAATGCCTACTGGTCAGCAGCTAAAGAACCCATCAGTAATGATTATGATTCAGATAGTAGCCTGAACATGGAGCCACTCCAAAGAAGAGTTCCAAGCTCGTTAGAGACTGACCAGTCAGAAGTATATTTCTCTTCTAACGACAGGCAGAACTTACAATGTGAACAGTCACCTCAAGCAGGCCCAGATGTTCATTTGATAAGGGGGTATGGTTCAGACTCTAATCAGCAGAGAAGAGGTTCAGGAAGTCTCTGCCATAGACTGGAGACAGTACAGGAAAGCCCTCTTGGCATTTCAGTCTCTCTTAGTAGTCCCAGCTTGGCATATTGTGATCCATACCTTGAGTCCAACCAGAGAACTGCAGAAAGAAGTATGGCCAACGAGGCCTATTATGACATGATGGGCCCCATTCAAAAGAATGTTCCCAGACCCCACTACATGAGCATTGATATTGATGCTGGCGATGGCCTTCTTTTGGGCACAGGGAGTCCCAATCCAGAAGATGATGATGATCTGTTTTCTCAGAACATGATGACTAACTGGAACTCCAACCACTCAGCAAACAACAACAGTTTAAGCGATCGTACGCAAGCTGTGGGTTTTCGAGATGCATACCTTGATTTACGTCACCCAACACCCTCTTCTCATGTTGAGAATTTGAAATCAAGAGTATTGGAAACAAGCAACAGTTGTACATATAATTGCATTGATTCTCTCAAAGTCCACTCATACATGGAAGCCACAGATAGTACGCCCACCACTAACAACCCTCACACTGACTCAGAGGGTGGTGAGTACCTACATTTATGCCCTGAAGGTACTCAGGATGTTGAATCATCTTCCAAATGTCATTCTGTCACAGAAAGTCAGCATATTCATACACGGCAGAAGATCATTGCTCATAAACATATCAAAAACAATACATCAGACTTCCATGTAGGAGTTTACAGCAGAATGAATCCATCAACTCTTCCAACAGATATTGTAGTGACTAAAGAAAACATGTTACTCGAGACAAGGATATCCCCTGCACAAAAAATGAAACTTGGGACAGATGGTTCTACTGGTGTGTGTGTAAAAATGGTGTCATGCCCTAAGGATCTGCCTAAGAGTGTCTCAGAGTGTAACCATTTGACAGACGGGATAGTGCCCAACAACTCCAGTATCAGTCTGGTGGAAATTAATGACTGCAGTGATGACTGCACTGACATCCCCTCTGGAGTTTTTGCAGATTATCCTTTGGACTATACAGAGGTGGGCAGTATTGAACTGACTCATAGACCGTTACAGAGAGAGACTGGGTCCAGACATTGTGAGGACACAATTAATCTTGCCTCTAGCAGCAGTCCATGTGAGGCCTTCAGCCCTGATAGTTATCACACATCCATTCTGCCGAAATCCCTAGACAGTGGCTATGACACAGAGAACAATGAATCCCCAGAGTTTATCTTGAAAGACCTTGAAGGAAATCCAGCCCTTAGCACCAGTGTAGAATCAGACGAGTGTGACATGGTGCTCCAGATGGACCTAGATGAAGATGTCAATGTAATGCTCCTGCATCCATCCAGCAGTCATCTTCCACTGATCAGCCTTGGTGAGAGGAATCAGTACAGAGACTCTGCTTATTTTTCTGACTATGACATGGAAAACGACAAGAGCCCCAGTGAAGGGGGCAGCACCTTTTTCAATCGCCAAGACGAGGATGATGTCTTTGAGCTCAAAGCAGAAAAGGAGGGCTCAGAAAAGACAGTTGGGAAAGAAGGACATAGCATGGAGAGTGAGAAGAGAAATAACAACTCTGTGCCAAAGGACAACAATGCTGCCCTTCATGCTAAACAATTTTGTCTTAAAAAGACAAATCCAAATCTGTGTTCATCACCTACATTGGTTCCAATGATTTCCATGCTTTCTCCCTTTCCTCCAGAGATGGGGGGATGCTTGACAAAGGAGTCAACTCCAGATGATGGTATTGGGTTGGAATCTGATCACTCTGCAGAGGAACCAAACTCGGAATGCCCTTCTTCCACAGTGTCCGAAGGTTCCTCCTCGACACAGGAGGCCTCGGGTGTGGAGGAGCACTCTAATGGAGACACCAGAGATTTTTCCTCAGCAGAGTCACTAGGCTCAGACTGTATCATAGTAAACTTCAGTGGAGAGATAATCCAAACAGAAGAACAAGAGGCTTGTAACAAAGTGGACAATCCAGAGCTTCCAAGGGAAGGACACAATGAGGAAAAAGAAGATGAGGATTCAGTGGAAGGTGGCATAGGTCAAGCTTTTTCAAGATCAAAGCGTGATGATTCCTTGGAGAACATTCTTCCAGCCTTGCCAGAAGACCTTGATGTCCCAGCTCCACTGGGGAATGGAGAGGAGGCAGACGAGGAGGATTCTGAGGATAGTGATGAGTCTGATGAAGAACTTCGTAGCTACAACATACAGGAGCAGAGTGAAGAGAGTGATGACGAGTTCCCCGTAGTGCCTGTCATTGTGAGCGACCGTAGCAGTGCACGGCATCTACGCAGCCTCCTCAAAATGCCCTCCATACTTACACAGTCCTTCTGCGATGAACTGGAGAGCAAGAAAAAAGCTGTGTCATTCTTTGATGACGTCACTGTGTTTCTGTTTGACCAGGAGAGCCCCACGGGTGAGCTTGGGGACTACAGTTTTCCTGTGGAGGCAGAACCTAATGGCCAGGCTTCAGAAGTGGAGCTGCCACGACCCCAAGATAGGGTCACTGCCCCTGAGGATTCACCAGGAAGGAATTTCTTAGAAGAAAGTGGTGCATTTGAGTGGCAAGATGATTTTCCATTGATGCCGAGCCCTTCAACATCAGAACCTGGCTCTGAAGAAATCACCACACCACCCAACTCTCCCGTCAAGTCTCCAGATGAAAAACCAGCACCAACGCTTTCCCGATTTAGTGTCTCTCGTTTCTCCATTACGCATGTGTCTGACTCTGACATGGACTCCATGGGAGGTAACAGTGAGAATGGAGCCCAGGAGTAAAGGGGTCATTAACATGTTTAATTAAA

Function

symbol description
aatka Predicted to enable protein tyrosine kinase activity. Predicted to be involved in brain development and peptidyl-tyrosine autophosphorylation. Orthologous to human AATK (apoptosis associated tyrosine kinase).

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG:

id description
K17480 AATK, LMTK1; lemur tyrosine kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000033_01792241_01801250.mRNA True 5060 mRNA 0.48 13 1792215 1801271

Neighbor

gene id symbol gene type direction distance location
CI01000033_01783293_01786740 NA coding downstream 5471 1783061 ~ 1786744 (-)
CI01000033_01757249_01761108 NA coding downstream 31107 1756593 ~ 1761108 (-)
CI01000033_01534011_01536432 NA coding downstream 255403 1532871 ~ 1536812 (-)
CI01000033_01460962_01480142 NA coding downstream 312073 1460962 ~ 1480142 (-)
CI01000033_01415209_01416422 NA coding downstream 375793 1415138 ~ 1416422 (-)
CI01000033_01805479_01816594 NA coding upstream 3816 1805087 ~ 1816594 (-)
CI01000033_01924737_01927904 NA coding upstream 123435 1924706 ~ 1928061 (-)
G168952 NA non-coding downstream 3613 1767154 ~ 1788602 (-)
G169007 NA non-coding downstream 20778 1770712 ~ 1771437 (-)
G168963 NA non-coding downstream 47202 1677635 ~ 1745013 (-)
G168982 NA non-coding downstream 73415 1718285 ~ 1718800 (-)
G168947 NA non-coding downstream 135533 1620070 ~ 1656682 (-)
G169013 NA non-coding upstream 48638 1849909 ~ 1850129 (-)
G169037 NA non-coding upstream 90520 1891791 ~ 1892030 (-)
G169039 NA non-coding upstream 99102 1900373 ~ 1900622 (-)
G168847 NA other downstream 562666 1225588 ~ 1229549 (-)
G168237 NA other downstream 1020624 757371 ~ 771591 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026782 aatka coding NC_007114.7 CM002887.2 51899578 ~ 51912019 (-)