XLOC_009016 (CR396585.1)


Basic Information

Item Value
gene id XLOC_009016
gene name CR396585.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 7032097 ~ 7034722 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017779
tttttaaaccttttagaTTTCGGAACCAAAGATGATTAAAGCAGGCGGGGGTCTGTCAAGCCGACGGCCATCAATCAGCACACTGCCCAGCAGGAAAAGCCTATCAGAAAGAAGGGGAGGATCTAAAACTATGaTTGAAAATGATCTCAAGCACATTGTTCAGACATAATCACCAGCATGGGATCACCTGGATGGAAAGAAAGATAAACAGCTTAAATTTATACAAAAGATCTGGGAAAGACTGAAAAAACCTGGTATTACATCATATCTTTTccagtgttaggttgcagctagaagggcatccgctgcataaaacttgctgaataagttagcggttcattccactgtggcgaccacacattaataaaaggactaagctgac

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097476

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017779 True 382 lncRNA 0.41 3 7032097 7034722

Neighbor

gene id symbol gene type direction distance location
XLOC_009015 CR396585.2 coding downstream 23159 7008822 ~ 7008938 (-)
XLOC_009014 NA coding downstream 55176 6968381 ~ 6976921 (-)
XLOC_009013 mrps22 coding downstream 65852 6948644 ~ 6966245 (-)
XLOC_009012 ech1 coding downstream 85811 6926987 ~ 6946286 (-)
XLOC_009011 meis3 coding downstream 168780 6838039 ~ 6863317 (-)
XLOC_009017 NA coding upstream 29746 7064468 ~ 7065313 (-)
XLOC_009018 SLC7A1 coding upstream 265034 7299756 ~ 7337537 (-)
XLOC_009019 gbe1b coding upstream 349798 7384520 ~ 7598542 (-)
XLOC_009020 bach1a coding upstream 1136162 8170884 ~ 8191992 (-)
XLOC_009021 tnfrsf19 coding upstream 1200809 8235531 ~ 8309217 (-)
XLOC_009008 NA non-coding downstream 1130115 5898410 ~ 5901982 (-)
XLOC_008997 FO704791.1 non-coding downstream 1648917 5383062 ~ 5383180 (-)
XLOC_008973 CU467614.1 non-coding downstream 2666825 4365158 ~ 4365272 (-)
XLOC_009023 NA non-coding upstream 1315307 8350029 ~ 8394601 (-)
XLOC_009025 NA non-coding upstream 1564869 8599591 ~ 8602094 (-)
XLOC_009028 CR847977.1 non-coding upstream 1952921 8987643 ~ 8987759 (-)
XLOC_009031 NA non-coding upstream 2154431 9189153 ~ 9191277 (-)

Expression


Co-expression Network