XLOC_009017


Basic Information

Item Value
gene id XLOC_009017
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 7064468 ~ 7065313 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019120
CAGAGTGTTCCACTGGGCTCAAATGTACGACACCAGTTCTGTGTGATTAGCGAAAGAATGAATGTTAAAAGTTTACTGCGATTTAAACTCCAAAAAACATCGACTTGAGATGTAATCACGACacgacgaaaaaaaaaaatgaacgaagCTTCCCAATACCGTCTCTCCTTCGACAGGTGAACTGATTTGATCCGCTTCCTGCTTCTTTCAGCTGGCTGAGCGAAACAAGCGATCGCTCAGTTTTTTCCCTGTTTGCTTTGAACACCCTCCCTTTCCACACGTATCCGCTATTTCGCGAACAGTTCAGCTCACAGACACTCGAACCTAGCCGTGATCTCACCCGGAAATAGTCATAAAGTAATGCGATGACAACTTATACAGTCGAGAATGTTTTAATGTATTGCAAATATCTTCTCGCAGAACTCCTCTCCTAGGCCGTAGGCTATGAACTGCGTGACTCTCACTCAGCTTGCGCATTCCTCCATTCCGCTGGGATGACGGTGCACTGGACGTATTGGCTGCCTGGTTTCTTCAAATGACCTGGTACGCCTTTTTATTTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019120 True 560 lncRNA 0.45 2 7064468 7065313

Neighbor

gene id symbol gene type direction distance location
XLOC_009016 CR396585.1 coding downstream 29746 7032097 ~ 7034722 (-)
XLOC_009015 CR396585.2 coding downstream 55530 7008822 ~ 7008938 (-)
XLOC_009014 NA coding downstream 87547 6968381 ~ 6976921 (-)
XLOC_009013 mrps22 coding downstream 98223 6948644 ~ 6966245 (-)
XLOC_009012 ech1 coding downstream 118182 6926987 ~ 6946286 (-)
XLOC_009018 SLC7A1 coding upstream 234443 7299756 ~ 7337537 (-)
XLOC_009019 gbe1b coding upstream 319207 7384520 ~ 7598542 (-)
XLOC_009020 bach1a coding upstream 1105571 8170884 ~ 8191992 (-)
XLOC_009021 tnfrsf19 coding upstream 1170218 8235531 ~ 8309217 (-)
XLOC_009022 si:ch211-113p18.3 coding upstream 1249619 8314932 ~ 8319988 (-)
XLOC_009008 NA non-coding downstream 1162486 5898410 ~ 5901982 (-)
XLOC_008997 FO704791.1 non-coding downstream 1681288 5383062 ~ 5383180 (-)
XLOC_009023 NA non-coding upstream 1284716 8350029 ~ 8394601 (-)
XLOC_009025 NA non-coding upstream 1534278 8599591 ~ 8602094 (-)
XLOC_009028 CR847977.1 non-coding upstream 1922330 8987643 ~ 8987759 (-)
XLOC_009031 NA non-coding upstream 2123840 9189153 ~ 9191277 (-)
XLOC_009039 AL807754.1 non-coding upstream 3120741 10186054 ~ 10186169 (-)

Expression


Co-expression Network