XLOC_009018 (SLC7A1)


Basic Information

Item Value
gene id XLOC_009018
gene name SLC7A1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 7299756 ~ 7337537 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017780
gctttcaaTCGCAGCTTAACGTTATGTCCTTTTTCTAAGGGTCAGATCGCGCCAAAGCAGAAAAAAacttgtatttattcatttatttatttatttacggtGTTGCCCTTAAGTGGAATTTTAAGGGAGAAAAGTCACCTACCTACATCTTGGTGTGCATTTACCGCAGAAAGCGAGAAAGCAGTTTTGTAACTTGGTAACTGCCCCTTTAACGTTCCATGTGAATGCAAATGAACGGGATGGAAATGAGACAAGAACGCTCTCGGTTTGGGTGTTGGCAACGCGGAAGGATGGTAGAAAACCACCAATGATCCCTTATGGGTGGGGTTTACTCGAGGGTGAAGGGGTACTAGTATTTTATAGTAAAATACTAGTAAGAATAGAAAGTCAGCTGCTGCTGTCTGCCGGTTGAATGTTTATTTTTCGTCGAGTTGGAATGTGTCAGTTTTGAGGTCGTTGAGTGAATTAATTCGACTTCCTAAAGGTCACTGGTCCTTCTGTCTCTATCTGTGTGGGTGAGTGTTTGAGTGTTCAGAAACGTCAGCATGGTTCTCACCATCATGAAAGAGCTTGGCAAGCAGCTGCTGCGCGTGAAGGTGGTAGACTGCAGCACAGAAGAGTCTCGGCTCTCTCGATGCCTCAACACATTTGACCTGGTGGCTCTGGGAGTGGGCAGCACACTGGGCGCTGGCGTCTATGTGCTGGCCGGAGCCGTGGCACGGGAAAATGCTGGACCAGCAATCGTTCTGTCCTTTCTGATTGCAGCGCTGGCCTCAGTTATGGCTGGACTGTGTTATGCTGAGTTTGGAGCTCGTGTGCCTAGGACAGGCTCTGCGTATCTGTACAGCTATGTGACAGTGGGGGAGCTGTGGGCCTTTATCACCGGCTGGAACCTCATCCTGTCTTATATTATAGGAACATCCAGCGTTGCCCGAGCGTGGAGCGCCACCTTTGATGAGCTCATTGGGAAGCATATAGAGGAGTTCTGCCGGCGGCACATGAGCATAAACACACCAGGACTGGCCGAGTATCCAGACATGTTCGCTGTGATCATCATCCTCACGCTAACAGGTCTGCTGGCATTTGGGGTGAAGGAGTCTGCTATGGTTAATAAGGTGTTTACCTGTGTAAACGTGCTGGTACTGATGTTTGTGGTGGTGTCAGGACTGATCAAAGGAACTCTCCAAAACTGGAACCTGAATCCAGAGGACATCCTCAACCACACCACTTCTGCAAAtGTGTCTGTGCCACTGCCAACTGAAGAGAGTCTGGGTTTTGGTGGATTCATGCCGTTCGGCTTCTCTGGAGTTCTGTCCGGTGCCGCCACCTGTTTTTATGCTTTTGTCGGGTTTGACTGTATCGCCACAACAGGTGAGGAGGTGAAGAATCCCCAGAGGGCTATACCCATTGGCATTGTAGCCTCTCTCCTCATCTGTTTCGTCGCTTATTTCGGTGTTTCGGCTGCACTGACGATGATGATGCCGTACTACATGCTGGACAAAAACAGTCCTCTGCCTGTGGCCTTCAAATATGTGGGCTGGGAAGGAGCGACGTACGCTGTAGCCGTTGGCTCTCTTTGTGCTTTGTCTACCAGTCTGTTGGGCTCCATGTTCCCAATGCCACGTGTAATATGGGCCATGGCTGAAGATGGGCTGCTCTTCAAGTTCTTGGCCAACATAAGTGAAAAATCCAAAACGCCCATAATGGCCACTGTAACTTCCGGCATAGTGGCAGCCATCATGGCTTTCCTGTTTGATCTGAAGGATCTGGTTGATCTGATGTCGATTGGCACTCTGCTGGCTTACACTCTGGTTGCAGCCTGTGTCTTAGTCCTGAGGTACCAGCCAGAGCAGCCCAGTGTGAATGTACAGTATCAGAGAGCCAGTTGTCAGGAGGAAACAGAGGCCGAGTCCATCAATGAGAGCAGTGCTGGCTTCCTGCCTGGATCTTCTGATCTCTTTAGCCTTCGCAACCTGCTGTCCCCCCAAAACGAGGAACCTTCTCGCCTCTCTGGCCTCACGGTCAACATCTGCACCAGCATATTAGGCGTTTtggtgtgtgtgttctgtgtggttgcagTTCAGGGAGGATTTCAAACTTGGACTCTTGCAGTTCTTATCTCTCTGGCTTTAGTTTGCTTGATCATCACCTTGTTAATATGGCGGCAGCCTGAGAGCAAGACAAAACTTTCTTTTAAGGTTCCTCTGCTGCCGTTTCTCCCCGTTCTCAGCATGTTCATTAATGTGTACCTGATGATGCAGCTGGACAAAGGCACCTGGATGCGTTTTGCTATTTGGATGGTAATAGgatttattatttattttggctacGGGATCTGGCACAGCACAGAAGCAGCATTAGCACGGAGCGAGACCGAAGACATCAACGCCTTCAAACCCACAACAACAGATGAAGCAGCCACACCTGAGAAAGAGGCGTTTTTGGGCAACTGTATTAATGACCGAGCAGAGGAGAACAGTGACCCTTGAGAAAACACTGTTCCAGAATGTGCTCCATGTACCAGTGTACGACAAACACAAAGCTGCTACTGACATTCATGATGCTTCTATCAGATTGTATGTGTTACTGTAGATCCAAAGATTCTTTTAAGGCAGCATTACAACATGTGACGATTTTAAAATTTGCCTTTTATTCAGGTAAACCATGAAGGACAGCATTACAAATGTGTACATATGAATGTACATTGCACTATTAGAGCAACAAGTTCTTCCTTTTTGTCTACTgggttattttaatatattttatttttgtagcaTGTTCTCAtcgtgctttttttttaaaggggtccTGAGCAAAACCCATGTAACATTGTTAACCATTATTCTTCAGCGTGCATTTTGTATATGAATGCAAAATTCTAATACAATTTGTTACTATTTTGTTTCTTTCTAGCTTgttttaaaacagtaataattACTCGGCTAATTTCAAATGCATTCATCTTTATAATGTTCACCTTTATTTATCTGACCTAAACCCCAAAGTATGCTTCACTGGTAATTCGTCCTCTGAGATACTGAACTGTTTGCACAACATTAACCCTTTTTACATAATATAGATAACTCATAGATGTGCTACTTTTCCCTCAAGCTGTCAAGTAACATTCTACTGAACTGAGCAACACGCCCTGGTTGATTCATGATTATGAgtaaaaatcattattaaaaaccataaatataaatgtattatgttgCATCTAAAATGAAGTGTGCATACATAGCAAGAAGTATACTTTGGGACTAGTATGCTAATTTCTTGGCATGAGAATTTTTCTTGCTGCTTTTCACAGCTTTGCAGGGAAgccagagagatttttttaaatattcagtcaGTGCCTTTTTCCTAACTTAATGGAGTGAAAGAGACTATCTCCTCACACTGGTGACATGTATGGTGCCATACATTTATCAGTCTGCTAAATGTCATACttctttaacccttgtgtgctgttggagaTGATTTTGCCAAAACTTTCTAtgcgtttcagcaaatggaataattttttatcacaaattatattttgatacatattttggaaaaaataacACTCacatttactacccttttgttatgttagtggctgttttgccccattgactttcattataattatatttttgattgcaaagccatgacaccatattacTAGTAtttattcttgattgttggtggtttttcttGTTGGGAAGTagtcaaatttgtaatttttttttctgttgattatCAGTGGCAGTGCAAAAAGCTTAATGTGTGGCTTTTATGTGATGCATATTGTGTGCTTAGGAGTGTGAGAGAAACCATTGTGCAAATATTTTGATGTGTCTTAGAAAATAAGAATCCTCAGCTCTTTGTAACAtaagtaagtgtatttatgcacgcaCATTATAAtctgctgttatactccataaaACTCCATATAAACGCCAGGAACTTATTTGCACAGGCCTATCAAAAGGGTTAATGGTGAGAACTAATGATGACCAACAAtagaaattacacatttttttctcttcCCAACAAGAGAAagcaccaacaatcaagaatgcatgattatatgctgtcatggctttcaaaatcaaaaaatgtcattttaatggaagtcaaggGGGCAAAAACCACCACATAACGAAAGgaaagtaaaaatataaacaatacacaagggttaaaagtATTTGTAATGAGGGGAGAAATACTATTGAGATTTAAGGCTTGGATATAGAAAAAGAGGCTTTCATGAGGAATGCATAGcctgtttgtttcattttctttttttattcagctgTTGTGTGCTTGTTAATTCCCTGTTTGCAGTTTTACACTTTCATCTGGTGTTGggctttttatctttttttttttttgtacagtattttttGATGTGTGTATTGTACTTCATTGTCTATTCATTTGTCTTGTTAGTTTATTCAAAACCAAAAACAAGCCAAAgattgtgatttgtgtttttattatgaaTTGCTACATTATCTTGTTGACATTtagcattaaaaaacaaaacagatctaCTTAGAAAACTGATTTTCCAAAAAACATGTTCAGCAGTTTAAGTCATTGTCAAAAATTTGGCTGTTCATGTTGTTAAAAAGGAGctgtaaatgtactgtaaatattagcTGTTTTTCctgcaataaattattttttgtttgtaaaaaaaaaaaaaaaaattaaattgttttttcattttagtaATGAACAAAAACTTCCCAGTGATagattgctgctggaagggcatctgctgtgtaaaacatgctggaagttggcggtttattccgctgtggcgaccccagattaataaagggactaagccgaaaaggaaattaatgaatgaacaaaaacgATCAGTTTGTATTAATGCCTGGTGTTGAAAGTGTTTTCTGCACTCCCAAGttatatcatgttttaaattatttattaataatatattatgatattCTAAGATGCCCAAGgttgaaataaatgttttcagcATTAAATGCAATTTTTAGGCGTGAATTACATTTTACTTATTAAATAATTGTGCGCGGCAATTGATGCGGTGTTTTGAACATGAAAGTAATTTTTCaacaacattttaaatacatCAGTCAAATTGCTGGCGTTTGTCTGTTCACTGTGTATTGGTATTAAATGACTCCGCCCATGAAAGCGA
>TCONS_00017781
AGCTGCTGCTGTCTGCCGGTTGAATGTTTATTTTTCGTCGAGTTGGAATGTGTCAGTTTTGAGGTCGTTGAGTGAATTAATTCGACTTCCTAAAGGTCACTGGTCCTTCTGTCTCTATCTGTGTGGGTGAGTGTTTGAGTGTTCAGAAACGTCAGCATGGTTCTCACCATCATGAAAGAGCTTGGCAAGCAGCTGCTGCGCGTGAAGGTGGTAGACTGCAGCACAGAAGAGTCTCGGCTCTCTCGATGCCTCAACACATTTGACCTGGTGGCTCTGGGAGTGGGCAGCACACTGGGCGCTGGCGTCTATGTGCTGGCCGGAGCCGTGGCACGGGAAAATGCTGGACCAGCAATCGTTCTGTCCTTTCTGATTGCAGCGCTGGCCTCAGTTATGGCTGGACTGTGTTATGCTGAGTTTGGAGCTCGTGTGCCTAGGACAGGCTCTGCGTATCTGTACAGCTATGTGACAGTGGGGGAGCTGTGGGCCTTTATCACCGGCTGGAACCTCATCCTGTCTTATATTATAGGAACATCCAGCGTTGCCCGAGCGTGGAGCGCCACCTTTGATGAGCTCATTGGGAAGCATATAGAGGAGTTCTGCCGGCGGCACATGAGCATAAACACACCAGGACTGGCCGAGTATCCAGACATGTTCGCTGTGATCATCATCCTCACGCTAACAGGTCTGCTGGCATTTGGGGTGAAGGAGTCTGCTATGGTTAATAAGGTGTTTACCTGTGTAAACGTGCTGGTACTGATGTTTGTGGTGGTGTCAGGACTGATCAAAGGAACTCTCCAAAACTGGAACCTGAATCCAGAGGACATCCTCAACCACACCACTTCTGCAAAtGTGTCTGTGCCACTGCCAACTGAAGAGAGTCTGGGTTTTGGTGGATTCATGCCGTTCGGCTTCTCTGGAGTTCTGTCCGGTGCCGCCACCTGTTTTTATGCTTTTGTCGGGTTTGACTGTATCGCCACAACAGGTGAGGAGGTGAAGAATCCCCAGAGGGCTATACCCATTGGCATTGTAGCCTCTCTCCTCATCTGTTTCGTCGCTTATTTCGGTGTTTCGGCTGCACTGACGATGATGATGCCGTACTAC

Function

symbol description
slc7a1 Enables L-histidine transmembrane transporter activity and arginine transmembrane transporter activity. Involved in carboxylic acid transport. Located in membrane. Part of apical plasma membrane; basolateral plasma membrane; and protein-containing complex.

GO: NA

KEGG:

id description
ko05206 MicroRNAs in cancer
ko02000 Transporters

Ensembl:

ensembl_id ENSDARG00000100227

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017780 False 5185 mRNA 0.40 12 7299756 7337537
TCONS_00017781 True 1101 mRNA 0.52 6 7314607 7337148

Neighbor

gene id symbol gene type direction distance location
XLOC_009017 NA coding downstream 234443 7064468 ~ 7065313 (-)
XLOC_009016 CR396585.1 coding downstream 265034 7032097 ~ 7034722 (-)
XLOC_009015 CR396585.2 coding downstream 290818 7008822 ~ 7008938 (-)
XLOC_009014 NA coding downstream 322835 6968381 ~ 6976921 (-)
XLOC_009013 mrps22 coding downstream 333511 6948644 ~ 6966245 (-)
XLOC_009019 gbe1b coding upstream 46983 7384520 ~ 7598542 (-)
XLOC_009020 bach1a coding upstream 833347 8170884 ~ 8191992 (-)
XLOC_009021 tnfrsf19 coding upstream 897994 8235531 ~ 8309217 (-)
XLOC_009022 si:ch211-113p18.3 coding upstream 977395 8314932 ~ 8319988 (-)
XLOC_009023 NA coding upstream 1012492 8350029 ~ 8394601 (-)
XLOC_009008 NA non-coding downstream 1397774 5898410 ~ 5901982 (-)
XLOC_009025 NA non-coding upstream 1262054 8599591 ~ 8602094 (-)
XLOC_009028 CR847977.1 non-coding upstream 1650106 8987643 ~ 8987759 (-)
XLOC_009031 NA non-coding upstream 1851616 9189153 ~ 9191277 (-)
XLOC_009039 AL807754.1 non-coding upstream 2848517 10186054 ~ 10186169 (-)

Expression


Co-expression Network