XLOC_009023


Basic Information

Item Value
gene id XLOC_009023
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 8350029 ~ 8394601 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019121
CTTTGGATGATTCAGTCGACTTTGTGTCCAAAAGATGGCGCCAAAACATAACAAAGGTCCCCACCACACCAAACCTCAATTCTGACATGGTGGCCTATAAGCATTATTACCAAGATTTGAGGAGCCCCATACTGATCTCGCCTGCTCTACAGCGCCTTTCTGAGGCAGAAGGAGATTGTCAGCTCTCATATTAAAAGAGTATTCGGCGGATTAAAAGGTGACGTGAGAACAGCAACTGCAGCCCGACTGATCTGACCCACTGAACAGAAGAGTAATGCGGAAGGAGAGAAGAGCCTCTAACGAAACATGCTGACACCATCCTGAGATTCGCAAAAGGTCATCCAGATCACATTTCTAACAGGAACAGCAATGGACAGGCTGTGATTACAACAGGAATGTCCATGTGGTCCTGGAATGCTGTCTGGCTTTATATACATTCCAATATTCAATACCACAATATACTAGTGATGACCATGATATTACTGTGAGCACTTCAAAACTCCTATcaataattatgtattattttagcGCTCTTTAAGAATACTTAAATTGGCGTATTGCAGCGGTTTTCATCACAACACCATACACTTAAATATATATTACgagtgtaacgatacactcagctcacgatacgatgtgtatcacgatatttggaataaaaattttaaatttaactgaaatgcaaattttaccaagtaaactattttttatgtatttcttttgtttcaacttgttaaactgatccttctttaagaaaataaattaaacaggcctgtctctgaaaaaaaaaaaaacaatttaaaacttcttaaaaaatattattgaaattacaGAGTGAAATGAattatctctaaatatatttatggatagtcagaacaaaggtttaaatgctaaaacggcttgccatacgcgcgcgtctatcatccgccctctgtagtaacagctcacggtcagctcatgtcatgtgtgattttgcggccgccaatacatcattatatgaaga

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko03070 Bacterial secretion system
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019121 True 1003 lncRNA 0.38 3 8350029 8394601

Neighbor

gene id symbol gene type direction distance location
XLOC_009022 si:ch211-113p18.3 coding downstream 30041 8314932 ~ 8319988 (-)
XLOC_009021 tnfrsf19 coding downstream 40812 8235531 ~ 8309217 (-)
XLOC_009020 bach1a coding downstream 158037 8170884 ~ 8191992 (-)
XLOC_009019 gbe1b coding downstream 751487 7384520 ~ 7598542 (-)
XLOC_009018 SLC7A1 coding downstream 1012492 7299756 ~ 7337537 (-)
XLOC_009024 npas1 coding upstream 30110 8424711 ~ 8517555 (-)
XLOC_009025 NA coding upstream 204990 8599591 ~ 8602094 (-)
XLOC_009026 arhgap35a coding upstream 209876 8604477 ~ 8763106 (-)
XLOC_009027 rab4b coding upstream 419154 8813755 ~ 8856785 (-)
XLOC_009028 CR847977.1 coding upstream 593042 8987643 ~ 8987759 (-)
XLOC_009017 NA non-coding downstream 1284716 7064468 ~ 7065313 (-)
XLOC_009016 CR396585.1 non-coding downstream 1315307 7032097 ~ 7034722 (-)
XLOC_009015 CR396585.2 non-coding downstream 1341091 7008822 ~ 7008938 (-)
XLOC_009014 NA non-coding downstream 1373108 6968381 ~ 6976921 (-)
XLOC_009008 NA non-coding downstream 2448047 5898410 ~ 5901982 (-)
XLOC_009031 NA non-coding upstream 794552 9189153 ~ 9191277 (-)
XLOC_009039 AL807754.1 non-coding upstream 1791453 10186054 ~ 10186169 (-)
XLOC_009040 CT573316.3 non-coding upstream 2361609 10756210 ~ 10759101 (-)

Expression


Co-expression Network