XLOC_009025


Basic Information

Item Value
gene id XLOC_009025
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 8599591 ~ 8602094 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019122
CTGATGAATGACAACGCGACGTATGTTAAGAATTTTTGTCATTAGAGACACGTTTTACTcattattgagtttttttaaaaGGGTAAATGCAAAATATATTGCTAATTAATTTTAGACAACCTACTGAACCTCGCGTGAGGACCCCGATATGCTTATCGTTATATAAGCTACAAAAAGTCGTCGTCGTTTGTTGAATCCTTTGTCTCTGTATATCAGTAGTCTCGTCTCAACTTTCAGGAAAGTTTTGGAGTCTGAAGTAAATCTGAATGTCCGGTTGGTCTGATAAACAGGCGAGGCACGTACCGCTGCTCATCCGTGTCTTTCCGAGGCTTGAATTCAGATGCGTCCGTCCGACTCCAAACGATTCATACCGCCACAGGTGGAGCAGCTCTTATCAATATCAATACATCCCAAATCCAGCTCAGCTACACAGCATATCTGAAGGGGAAACTGTAAGCCTCTGAGTCAAAAATACCGTTACAAAGAGGCATAattgaatcatttttttaatcCTCAGATGGTGaacaGGATATGCCGGATTCCTTCAGCGCATGTTTGTCCTTAGACTAGACATCGATTGTCCGGGTCACGGTGGGTGTTTCGATTCTGATACCTCGATTGATGGCAGTGCTGGGAGTAAGGATGCTGTTATTGATCATCTAATGGTCAAACTGATGAatgctgctgtaaatgctgctgcCACTATCAGCCGAAAACACTCAAATACACCAAACACCTGGAGTACTTTCACTCTTTTCCCCAACCAACACATATACAGCTGAAGGAGAAATAAACAGATCACTTGTAAAGCATCTCTTTTTTTGATTTATGATTTTCTTAAAtgag

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019122 True 846 lncRNA 0.41 2 8599591 8602094

Neighbor

gene id symbol gene type direction distance location
XLOC_009024 npas1 coding downstream 82036 8424711 ~ 8517555 (-)
XLOC_009023 NA coding downstream 204990 8350029 ~ 8394601 (-)
XLOC_009022 si:ch211-113p18.3 coding downstream 279603 8314932 ~ 8319988 (-)
XLOC_009021 tnfrsf19 coding downstream 290374 8235531 ~ 8309217 (-)
XLOC_009020 bach1a coding downstream 407599 8170884 ~ 8191992 (-)
XLOC_009026 arhgap35a coding upstream 2383 8604477 ~ 8763106 (-)
XLOC_009027 rab4b coding upstream 211661 8813755 ~ 8856785 (-)
XLOC_009028 CR847977.1 coding upstream 385549 8987643 ~ 8987759 (-)
XLOC_009029 rhoub coding upstream 388483 8990577 ~ 9002155 (-)
XLOC_009030 rtn2a coding upstream 408797 9010891 ~ 9031996 (-)
XLOC_009017 NA non-coding downstream 1534278 7064468 ~ 7065313 (-)
XLOC_009016 CR396585.1 non-coding downstream 1564869 7032097 ~ 7034722 (-)
XLOC_009015 CR396585.2 non-coding downstream 1590653 7008822 ~ 7008938 (-)
XLOC_009014 NA non-coding downstream 1622670 6968381 ~ 6976921 (-)
XLOC_009031 NA non-coding upstream 587059 9189153 ~ 9191277 (-)
XLOC_009039 AL807754.1 non-coding upstream 1583960 10186054 ~ 10186169 (-)
XLOC_009040 CT573316.3 non-coding upstream 2154116 10756210 ~ 10759101 (-)
XLOC_009041 BX293559.2 non-coding upstream 2371623 10973717 ~ 10986106 (-)

Expression


Co-expression Network