XLOC_009031


Basic Information

Item Value
gene id XLOC_009031
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 9189153 ~ 9191277 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00019123
GACAGAGTTTGGACAGGGTGTTGTGTTCTTTACTAAGGTATCCATTGTTTCTAGCATGAGTCAACACTGCAATGAACAAACCCAATGTACACAAAGCAGTTCCACCTTTACAGCACTGCAAAGACATTATAAAACGGAATATCACATCAGGACAGGACTTCAGATTCACAAAACACATGCAGGCAATTTTAGTGAACATATAGTGAATTTACCCCATCCACATATTCAATGACATCCGAGAGATAAGTTTGTTTAGTTAGTTAAACTTCCTGATCCTCCACAACACTGTGcagtttgttttcagaaatgtgaTCCTTTAGCACTGTTTACATCTGGTATTAAGAAACATTTTCATGAATCTGATCATAAGTGGATAATGGTAGataaatacaggtgtaaacagggtcagaccaacgctatctcacggcaatttgtaactttttgatgtagtggttaattcatatgaattcatataaTCTTATTTGTACAAGTTAGTACAATTTGTTTATCCCCCAATAACGGATGGGTTAAGGGGCAGGGTGCCATGCtctcttttaaaaattgtacattttcgtacaactgaacccGTACGAATTTGTAGgaattagcctctaaactgacaaaacgtaaaataggcTGGGTCTGACACATCttgcgatttttatttatttttatttatatatttatttattttctccacTTTCAACCTTTACCTGATATGCGTGGTATTATACtggtaaatattatttttcaaacgATTCGATATCATAATTTTGCCTAATTTGGTATTTCTCACATAGCAATATTGTCTTTTAGCACTGTTTACATCTGGTATTAAGAAACATTTTTCATGAGTCTGACCATAAGTGGATAATGGTAGataaatacaggtgtaaacagggtcAGAGCAacgctatctcacggcaattcgtaactttttgatttagtggttaattcataaGAATTCATACTTGTACAATTTGTTATCCTCTAACGtcagttaggtttaggggtggggtgccacgcctccttttaaaaattgtacatttttgtacaactgaactcgtaagaatttgtatgaattagccactaaacaaatgtaaaatagtaaCATTTCCTTGTAAGATCAGGCTCAAGTCTGACACATCTTGCGATTTTCCACTTTCG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00019123 True 1167 lncRNA 0.35 2 9189153 9191277

Neighbor

gene id symbol gene type direction distance location
XLOC_009030 rtn2a coding downstream 157157 9010891 ~ 9031996 (-)
XLOC_009029 rhoub coding downstream 186998 8990577 ~ 9002155 (-)
XLOC_009028 CR847977.1 coding downstream 201394 8987643 ~ 8987759 (-)
XLOC_009027 rab4b coding downstream 332368 8813755 ~ 8856785 (-)
XLOC_009026 arhgap35a coding downstream 426047 8604477 ~ 8763106 (-)
XLOC_009032 calm3a coding upstream 42775 9234052 ~ 9272328 (-)
XLOC_009033 si:ch211-261a10.5 coding upstream 87715 9278992 ~ 9294929 (-)
XLOC_009034 trappc4 coding upstream 123900 9315177 ~ 9321970 (-)
XLOC_009035 sacs coding upstream 175824 9367101 ~ 9421481 (-)
XLOC_009036 gab2 coding upstream 253705 9444982 ~ 9593532 (-)
XLOC_009025 NA non-coding downstream 587059 8599591 ~ 8602094 (-)
XLOC_009023 NA non-coding downstream 794552 8350029 ~ 8394601 (-)
XLOC_009017 NA non-coding downstream 2123840 7064468 ~ 7065313 (-)
XLOC_009016 CR396585.1 non-coding downstream 2154431 7032097 ~ 7034722 (-)
XLOC_009039 AL807754.1 non-coding upstream 994777 10186054 ~ 10186169 (-)
XLOC_009040 CT573316.3 non-coding upstream 1564933 10756210 ~ 10759101 (-)
XLOC_009041 BX293559.2 non-coding upstream 1782440 10973717 ~ 10986106 (-)
XLOC_009042 BX293559.1 non-coding upstream 1906592 11097869 ~ 11099720 (-)
XLOC_009045 NA non-coding upstream 2223414 11414691 ~ 11423104 (-)

Expression


Co-expression Network