XLOC_009036 (gab2)


Basic Information

Item Value
gene id XLOC_009036
gene name gab2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 9444982 ~ 9593532 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017809
atttttaatgaaaaatgttaCTTTCGTACCCGCTTTCCCCTAATTAGCCTGTGTGTTACATTATTAGGCCTATTTTACATAGGCTAATATTTTTTCGTAATGAAAACTACTATTTGTAAATAATCAACCAGCACTGACAGCAAAATTGTGCATTACATACACCAGTCCACAAGGTGACGTGTTTCTCAAACTAATCAACAGATTGGGCGAAGTTACCGACGGCTGTTTCTAATCCCGAGAACACGTTCAGTGCGCTCTGTTGCGGCTCATTTGACAACACCGAGTTATTCCGTCCACGAAAGTACATTTGAACGTCTCAGACACCCTTACAAACTTTACACAAACCCACCAAAAGAGGGTGTAATGTAATAAAGACACCAACTACACATAAAACAGCCGGTGTGGCGAACTCCACACTTGCGCTTCATTGTCTCCGTTCATCCCTACAGCAAAGAGAAAGAGTCCCGTCCCTTGAACACAGTGGGCGTGGTGTATGTGCGAGTGAGTGGGAAAACAAACAGCAGACAACCAACACTTCCTACATCTTCAGCAACTCGAGCGTTCGTGCCCGCAGTGTTTACACAGAGACCCGCAGCGCGCACAGGACGCGTCCCATCACCAGTAAATGAAGCTCCGCATCCACGGCACTGCCCCGCGCGCGCTCAACATACATGGACCCGCAGCATCTGAGGACTTCAGACTGATCTGCTGCTGTTGATTGTGTTTTTTGCTTTCTGTAAAATGAGCGGAGGAGAAATCATCTGTCAGGGATGGTTGAGAAAGTCGCCGCCCGAGAAGAAGCTGCGGAGATATGCATGGAAGAAGCGATGGTTTATCCTGCGCAGCGGCCGCATGAGCGGAGACCCGGATGTGTTGGAGTATTACAAGAGCGATCATGCCAAAAAGCCCATCCGCATCATTGACCTGCACTGCTGCGAGCAGGTGGACGCAGGCCTCACCTTCAAGCGCAAGGAGTTTCAGGACAGCTTTGTCTTTGACATCAAGACAGCAGAGAGGACCTTCTACCTGGTTGCTGAAACTGAGGAGGAGATGAACCGCTGGGTTCGCTCCATCTGCCAGCTGTGCGGATTCAACCAGTCGGAGGAGAACCATCACGATGAGCGATCATCCAGCATTTCCCGCTCCTTGACTAATGAGCTGAGCAGCTCTCTGGCTCCACTGATTGGTGAACGCAAAACGTCTGTGCCTGCCCACTCCAGTCAGCCAATGCTGTTCACCTTCGACATACCTGTACGCCATTCCCATGGTCCCCTGTCTAACAGCGCTCCGCAGGACTACCTCTTCCTCCATCAATGCATGAGCCGCAAGAGTGAGAGTGCACGGAGTGCCAGTTTCTCGCAGGCCTCACGCAGCAGTCTTCTGGTGGGAAGTGACTCGGCGGTTCAGAGACTCACTCATGGTTTCTCCCACTGTTTAAATGGCATGGGTGCCCAGCTTCACGGCTTTTACAGCCTCCCCAAACCCGGCAAGCATCAGCAGCCCCCCTCGCGGACCGACTCACAGGAAGCCTGCTACGTTCTGCCCAGGAACTACAGCTCTGAAGGGGCATCTGAGCTTGATTCGGAAGACGTGTACACCTTTAAGACCCCCAATAACACTCTAGCGGCGCCCCAAACCAATGAGCAACGAGCTCTCGATAACTATGATTTACCAATTTACCAGATCCCCCGCACGTTTGACAAGAACCACAACGCCCTGATGCCGTCCAATGCTGACTCCACAAGCGTGCCTCCTCCAAGACCTCCAAAACCAAGCCAGGGCTCGGAGTCACGGTGGGGTGGCACGCTGCCCACGGGGGCTCAGAACGGAGAGGTGTCCACAGCGTCCGTCATACCCAGGAGAAACACCCTGCCAGCAGTGGAGAACATCAAACTTCATAGAGGATCCTCGTTTGAAACCAGCAGTCACCAGAGGCCAGTCTATTTTAACAACTCTGGTCAGTCGGTGGAGTCTGTATACGATGGATTCAGTTCTTACCTGAGAACTAAAGCCCCATTGACCCGCTCTGATAGTGCCGGCTCTGATGATAACTATGTACCCATGAATCCCGGCTCGTCCTCCTCCCCTCTCAGTGCTGCCCTGGCTGACAGTCCCAAAAATAACTATATTCCCATGAGCCCAGGTCCTCACCATTTTGATTTCCCAGGTTTCTCGGCAACATTACCGGCCAGGAAGGGTAGTACAGCATCATTGTGTCTCCGACCGGGGCGTCTCAGCGACGTCACACCACCACCAATCAACCGCAACCTGAAACCAAGGACAGCAAAACCAACACCTCTCGATTTGAGGAACAATGGCATCATTGATGAGCTTCCTTTCAAGAGTCCTATTACCATGTCTTGGACAAGGCCAATGCCTATGAACTCCATCTCGTCACAGCACTGTCGACCCATCTCAACCCAGAGCATCACCAGCACTGATTCTGCAGACAGTGAGGAGAACTATGTGGCAATGcaaAACCCAGTCTCTACCTCCCCAGCGATGAGTGGTACCAGCAGTCCTGCACCGAGGAATTGTGGTAATGTGGACTATCTGGCTCTGGACTTTCAGCCTGGTTCTCCTGGTCCACACAGAAAGCCGTCCACCTCTTCAGTCACCTCAGATGAAAAAGTGGACTATGTGCAAGTGGACAAAGAGAAGACGCAGGCCCTCCAGAACACCATGCAGGAGTGGACAGATGTGCGACAGTCAAGCGAACCGGCTAAAGGCATCAAGTCCTGATGACGTTCAACTGTCTACATTAAATGTGTTCCTTACTGTCAGTCCAAATGCTCTTATACAGTTACACGCTGATAGAAACTGGGACAAAATAGCGAATGATGCAGCAACTAAAGCCATGAATCCAACTAACTCCTTTAAAGGACTAAAATCCCTCAGCCTCCTGGACTGTGATGCTATGCATGTTAGAGACATGTTTAACTTCAAAGTTCAGTGCGACAAAATTTTAGCTACTTGCTCTTTCTGAGAGTGAGCGACTTCTTCTGTGGTATGTTGAAAATCATAATCTAGTTAATAGTAATGTGTGcaatttttttatgtgaaataCTTTCTTCAGCTTAAAAGTCAAAGAGAACCAAGTAAGCCATTTGATCCTCCCTGAAAACTGTAAACACTGTGACTGTTTGAAAACATTGCTCTGTTTGTTTGAGCATCCCGGCTAGCCTGGCATGGCAACACAGCTCAGCCAATGGCATGAGTTTGGGGGGGACTATTTAACCAATGACGTACAAGAAGAGCATTCAGGAAACCTGTTTGACACTCAGTACTGTTACAAATCTATTTGGTGGCACTAGTTAGGCAGATATGCCACTTTAACAGTGTTATAAGGGCAGAATAGCACATCATGCAAATGCTTTTCTGAAGTAACTATGGTCTGCCTACCAACTTGAATCGCAATTTATTAGGAGAGATGGTCGTTTTTCAATAACAACTAAGCAATGCAGGAATGcttgtaaaaaaaattcttatagGTGTTGAGTTAATAACTTCAGACATTGGGTCACAATCATTAAACATGCATACGTACAGATTTTTGCAAAACGTGCACAGCAGTgagaaaaaatctaattcattcaTTGGAAGATTATCATCAACACTAACATAGTGCATTgcgccaaagtccctttaaggcagggatgtcaaactcaattactGGA

Function

symbol description
gab2 Orthologous to several human genes including GAB2 (GRB2 associated binding protein 2).

GO: NA

KEGG:

id description
ko04014 Ras signaling pathway
ko04072 Phospholipase D signaling pathway
ko04071 Sphingolipid signaling pathway
ko04664 Fc epsilon RI signaling pathway
ko04666 Fc gamma R-mediated phagocytosis
ko04380 Osteoclast differentiation
ko05220 Chronic myeloid leukemia
ko04990 Domain-containing proteins not elsewhere classified

ZFIN:

id description
ZDB-GENE-130530-756 Orthologous to several human genes including GAB2 (GRB2 associated binding protein 2).

Ensembl:

ensembl_id ENSDARG00000105120

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017809 True 3677 mRNA 0.48 10 9444982 9593532

Neighbor

gene id symbol gene type direction distance location
XLOC_009035 sacs coding downstream 23501 9367101 ~ 9421481 (-)
XLOC_009034 trappc4 coding downstream 123012 9315177 ~ 9321970 (-)
XLOC_009033 si:ch211-261a10.5 coding downstream 150053 9278992 ~ 9294929 (-)
XLOC_009032 calm3a coding downstream 172654 9234052 ~ 9272328 (-)
XLOC_009031 NA coding downstream 253705 9189153 ~ 9191277 (-)
XLOC_009037 nars2 coding upstream 8105 9601637 ~ 9631592 (-)
XLOC_009038 tenm4 coding upstream 407021 10000553 ~ 10455569 (-)
XLOC_009039 AL807754.1 coding upstream 592522 10186054 ~ 10186169 (-)
XLOC_009040 CT573316.3 coding upstream 1162678 10756210 ~ 10759101 (-)
XLOC_009041 BX293559.2 coding upstream 1380185 10973717 ~ 10986106 (-)
XLOC_009028 CR847977.1 non-coding downstream 457223 8987643 ~ 8987759 (-)
XLOC_009025 NA non-coding downstream 842888 8599591 ~ 8602094 (-)
XLOC_009023 NA non-coding downstream 1050381 8350029 ~ 8394601 (-)
XLOC_009017 NA non-coding downstream 2379669 7064468 ~ 7065313 (-)
XLOC_009042 BX293559.1 non-coding upstream 1504337 11097869 ~ 11099720 (-)
XLOC_009045 NA non-coding upstream 1821159 11414691 ~ 11423104 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000154_00641532_00674274 GAB2 coding CI01000154 null 641532 ~ 674274 (+)