XLOC_009045


Basic Information

Item Value
gene id XLOC_009045
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 11414691 ~ 11423104 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00018815
GGGAGGATTTGGGTGTGTGGCGTGTACTGAAGCACCGCTTGTGCGTCACTACCGGAGTCCCGCTGGTCCCGCCTCTGCCCCTTCCGTTCCTGCAGGTAGACATTGTTTTGCTTTCCCTTTAGCGTCGGGTTGCGTAGTGGGTTTTAACTGGCTGTATTTAACTTCTTAGCATCTGCGGATCAGATTGGCTGTAGCCTGTGTTGCTGTCACCCCAGCTGGATCGCTTTTGTAATTCCTGGGCTGTGGTTTAATCTACAACTGCGTCCGTGAGTGCGGGTTGCTAAGTGACTTGCATACTTGAGgaGCTGAGGCTTCCAGGCAGGCCGTTAGTTGTCCATCGTGCGGTGGTGGGATACGACActgagtgcagtgtgtgtgttgtgtgctcacgtatgcttgtgtgtgtgtggtgcacttGCGGTAAGACCATTTGTAATTTTGTAGAGTTTGGTGCTACGTAACTAGCTTACCTGCCACTGGTAAGCCTCTACTCCTCCTCCTGTTGTTATTGTGTGTTATGTGATTGTGCGGCTACTATCAGCTATCAagctttttaaaagtgattttatattggataattaaggaaaataaagtatttttgtatTCTTGGTATTCACGTCTCATGCCTTTTCTTCACACAAAGAACCTGTGTTAATTTCCCTGTGATCAGGGTGGCGTAGTCagctttaatttagtatttttctc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00018815 True 705 lncRNA 0.47 2 11414691 11423104

Neighbor

gene id symbol gene type direction distance location
XLOC_009044 rab30 coding downstream 73056 11308462 ~ 11341635 (-)
XLOC_009043 prcp coding downstream 111000 11218246 ~ 11303691 (-)
XLOC_009042 BX293559.1 coding downstream 314971 11097869 ~ 11099720 (-)
XLOC_009041 BX293559.2 coding downstream 428585 10973717 ~ 10986106 (-)
XLOC_009040 CT573316.3 coding downstream 655590 10756210 ~ 10759101 (-)
XLOC_009046 fkrp coding upstream 256655 11679759 ~ 11683529 (-)
XLOC_009047 NA coding upstream 395380 11818484 ~ 11825881 (-)
XLOC_009048 NA coding upstream 447080 11870184 ~ 11875956 (-)
XLOC_009049 PRLHR coding upstream 529852 11952956 ~ 11956981 (-)
XLOC_009050 CR848025.1 coding upstream 553039 11976143 ~ 11976260 (-)
XLOC_009039 AL807754.1 non-coding downstream 1228522 10186054 ~ 10186169 (-)
XLOC_009031 NA non-coding downstream 2223414 9189153 ~ 9191277 (-)
XLOC_009051 NA non-coding upstream 565959 11989063 ~ 11992903 (-)
XLOC_009057 NA non-coding upstream 987880 12410984 ~ 12416138 (-)

Expression


Co-expression Network