XLOC_009054 (si:dkey-36i7.3)


Basic Information

Item Value
gene id XLOC_009054
gene name si:dkey-36i7.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 12251044 ~ 12270857 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00017839
cttattttttttcccttttcaggaGTCTGAACAGGGATGACAAACATCAGTCAATCTTTTTTCTTCCTCTCGCTCCTTTAAAAAGGTCATATATCACTtgccagaatgaaaaaaaaaaaacttcaatatgTCAGGTAAAATTTTATTGAAACCCTCCGGACTTGGTTATCTATCAAAATGATTGATTTGTAGCATTTAGCGTCCTGCTCTGCCAAATAAAACAGTCCATTTCAAGTCAATTACAAGCTCTCTGAGGTCTCAAAGTCAAGAAACAATATGGCCCCGATCAGTCTTCGCTTTTATACTGTGATGTAATTGGACGTTCCTTGGGCAATGATTCCAAAGGTTGGGCTCCGCGGTATTTTATCTTAGTTTGAAGGCCAGTGTTTATGGGCTAATAAATGCGTTTCAAAGAATTGTGGGGCGGCCAGATTTACGAATGCTCTGGGAGGGATGAAATACACCTCACTTAAGGAACtaaatacacactcacacacacacgcacacattagtCAGGAGCTCAGGAGGAAGAGGAGCCTTTCTACTGTACAGTTTTGCCATTGTGTGACCCACACAGAGCAGTCATGTCCTCAGGAGCAGCCCCTACAGTAGACTACGATGCTGACTTTTTCTATGACTATGAGACTCTGCGGATTGGAGGCTTGGTGTTTGCTGGGGTCCTTGTGGTCCTGTCTATCTTCCTCCTGACTGGTAACCGCATTCGACGGTGTGGCAAGGGGAAGggcaAGCATGGGGATGAAGCCATTTAACATCTGGACAGGATGAATTTGGGCCGTGAACAGCTTGTGAACTGAAAAGACAAATATTATCACACTCAACACTTTTTCTGGGATCTAATTATGATTTGTATTCAAAGCTTTGCTCATGCAAATATAATGttgaatacaaataaaacagtttaaaaagttt
>TCONS_00017840
AGTCTCAACAAAGTTCtttttcACTATGAGACTCTGCGGATTGGAGGCTTGGTGTTTGCTGGGGTCCTTGTGGTCCTGTCTATCTTCCTCCTGACTGGTAACCGCATTCGACGGTGTGGCAAGGGGAAGGTAAGTGCATTCAACTCACGTGTTTCTGATGACATCTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000103639

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00017839 False 930 mRNA 0.42 6 12251044 12270857
TCONS_00017840 True 168 mRNA 0.49 3 12258001 12258851

Neighbor

gene id symbol gene type direction distance location
XLOC_009053 dscaml1 coding downstream 21170 12071037 ~ 12229874 (-)
XLOC_009052 si:dkey-202l22.6 coding downstream 239654 12004777 ~ 12011390 (-)
XLOC_009051 NA coding downstream 258141 11989063 ~ 11992903 (-)
XLOC_009050 CR848025.1 coding downstream 274784 11976143 ~ 11976260 (-)
XLOC_009049 PRLHR coding downstream 294063 11952956 ~ 11956981 (-)
XLOC_009055 fxyd6 coding upstream 3090 12273947 ~ 12319134 (-)
XLOC_009056 tmprss13a coding upstream 55304 12326161 ~ 12360409 (-)
XLOC_009057 NA coding upstream 140127 12410984 ~ 12416138 (-)
XLOC_009058 scn4ba coding upstream 195995 12466852 ~ 12500938 (-)
XLOC_009059 NA coding upstream 245331 12516188 ~ 12545683 (-)
XLOC_009048 NA non-coding downstream 375088 11870184 ~ 11875956 (-)
XLOC_009047 NA non-coding downstream 425163 11818484 ~ 11825881 (-)
XLOC_009045 NA non-coding downstream 827940 11414691 ~ 11423104 (-)
XLOC_009061 BX897750.1 non-coding upstream 1553615 13824472 ~ 13824604 (-)
XLOC_009063 NA non-coding upstream 1791756 14062613 ~ 14064350 (-)
XLOC_009068 NA non-coding upstream 1958391 14229248 ~ 14232070 (-)

Expression


Co-expression Network