XLOC_009080 (CR936977.1)



Basic Information


Item Value
gene id XLOC_009080
gene name CR936977.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 14883291 ~ 14884061 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00017888
CAGAATATATTAAAGATTCTTTTTAGCAAGAATGTAGTTATGTAGACttgatatataatgttttttaatgaagTAAATGGCTATTTTCAAGAGAATAAGCATTTTCTTTGATGTGACGACAGTGTCCGTGATCCGCCATTCCAAACGAAAAAAGCTTCGTTGCTAACGTTAGCTCAGTCCTTTGTGAATTTACCGTGGCTTTTACTGTGGTTAACATTAAGCATGCGTTTAGATAGTTGTGAACGGACAGTACCATACTGATTTTGTTATAGAACGATTTGGTCTGGCGTTAGGGCACTACTGACtgtcttaagcagGTTGTCGAATGTGTGCCCATACTGGCGTAACATTAACTTTTAACGTAAAGGGCGTCCATTTatagttctttatttttttacgtGAGATGCTGTAATTATGTCTTTGGGGTTATAATGCACTTAATAGGCTAACTTATATTCACAGCAAGTGTTT

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000100144

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00017888 True 471 lncRNA 0.36 2 14883291 14884061

Neighbor


gene id symbol gene type direction distance location
XLOC_009078 or129-1 coding downstream 102689 14776854 ~ 14780602 (-)
XLOC_009077 p4ha3 coding downstream 127973 14674928 ~ 14755318 (-)
XLOC_009075 si:dkey-260j18.2 coding downstream 241105 14630690 ~ 14642186 (-)
XLOC_009076 CR388387.1 coding downstream 247506 14635669 ~ 14635785 (-)
XLOC_009074 slc5a2 coding downstream 257918 14602520 ~ 14625373 (-)
XLOC_009081 NA coding upstream 144151 15028212 ~ 15030391 (-)
XLOC_009082 rrp8 coding upstream 337062 15221123 ~ 15230264 (-)
XLOC_009083 NA coding upstream 419666 15303727 ~ 15307751 (-)
XLOC_009084 ywhag2 coding upstream 464429 15348490 ~ 15357178 (-)
XLOC_009085 NA coding upstream 489998 15374059 ~ 15375518 (-)
XLOC_009071 BX957341.1 non-coding downstream 567821 14315354 ~ 14315470 (-)
XLOC_009069 NA non-coding downstream 635244 14246090 ~ 14248047 (-)
XLOC_009068 NA non-coding downstream 651221 14229248 ~ 14232070 (-)
XLOC_009063 NA non-coding downstream 818941 14062613 ~ 14064350 (-)
XLOC_009086 NA non-coding upstream 497427 15381488 ~ 15387422 (-)
XLOC_009089 NA non-coding upstream 579881 15463942 ~ 15464189 (-)

Expression



Co-expression Network