CI01000037_00775538_00779866


Basic Information

Item Value
gene id CI01000037_00775538_00779866
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000037
NCBI id null
chromosome length 4612320
location 775538 ~ 780087 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000037_00775538_00779866.mRNA
ATGGGAAACAACACTCAACAATCATTGCAGAAGTTTCAGGTGTTCAAAGAAAACTCCTCCATCTCATATAAGATTCTAAGGACTGAAGCTAATGACACGGGACTATATTGCTGCACAAACAACACTCACATCATACAGACTATACTGCTCATCAAAGATGCTCTGCAGCCCACAGAACCATCTCCCCCTTGTCCCACTGATCAGACACTGCCACTTACTATTAGCTGTGGGGTCGCCCTTGTTTACAACCTGTTCATCACAGCCTGCAGCTGTTACTTCGCACAGAGACAGGAAATGACAGGAAAAAAGAATAGAGTGGTGGGTGGCGGTAACCATTGTTCTGCAAAATGTCTAGCGAGATTCACATGCAGGATCTGTACCATTGTGTTTATGTTAACAATAACATTAACCTTTGTGGCTGCTCTGCGTGTGTCTCAGCCTTATCGTGTGGTAGGAAAAGAGGGAGAAGTGGCACTCCACTGCTCCTTTATTCCAAAGTCAAGGCTAGAGGAAATGCAGGTTTCTCTGTATAAAGGTTTGCGTGGCCAGGAGAAGATCTGCAGCGTTTTTGTCAACCTCTCTGAGCCCTACTTTACAACAGATGGCACAGTTAATTGCAGAGGGAATATTAGCTCTGGAAGAGTGGATATGATCATCACTGGACTCAGAGGGGAAGACACAGACCTCTATCGTTGTGAGATCGAGATTCTCTTCCCACCTCCATATCTCAGAGGGGTTGGGAACGGCACTGTTGTTTACATACAAGAAACCCCAAACTGCCCCACTGCATCCACCTTGAGCCAGAGTCAAAGCCAGAAGCAGACATCCGAGCGGGAATCCGTCAAAAATGATGTGGGCCCACTTCCACTGCTATATGCCATTCTAATCATCACTTCCTGCAGCTTTATTCTACAGATGATCATCTGCAAATGGAGGGCTCCTTCGTCTATGGCACCAATGCTTTCACAAAAAGAGAGCTATATGAAATTCTAGGGGGGCAATCTCCCCATTTACATGTACTCACATGTATTCTCACCTGCATGTACCTGCATGTCATTTTCTCCTGCATGTATTTACATGTATTTTTTTACTGCATGTATTGGCATGTACTCACTGTATTTTACAGTTCCATGTATGTATTCTCACCTGCATGTATTCACATGTATTTACATTACATTTGAACATTGTTTTTTTTCTTTCATTTTATTAATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000037_00775538_00779866.mRNA True 1214 mRNA 0.43 6 775538 780087

Neighbor

gene id symbol gene type direction distance location
CI01000037_00729466_00733346 NA coding upstream 41428 729017 ~ 734110 (+)
CI01000037_00687367_00687808 NA coding upstream 87678 687367 ~ 687860 (+)
CI01000037_00633378_00678193 ABI2, ABI2A coding upstream 96358 633338 ~ 679180 (+)
CI01000037_00625438_00630273 TMEM237A coding upstream 145228 625438 ~ 630310 (+)
CI01000037_00606067_00621968 MPP4A coding upstream 153570 606067 ~ 621968 (+)
CI01000037_00784200_00785176 NA coding downstream 3498 783585 ~ 785176 (+)
CI01000037_00796721_00807196 NA coding downstream 15265 795352 ~ 807334 (+)
CI01000037_00808744_00809273 NA coding downstream 28657 808744 ~ 809873 (+)
CI01000037_00874555_00887437 NA coding downstream 94400 874487 ~ 888017 (+)
CI01000037_00987906_00988350 NA coding downstream 207819 987859 ~ 989246 (+)
G174633 NA non-coding upstream 65997 705041 ~ 709541 (+)
G174580 NA non-coding upstream 271560 503746 ~ 503978 (+)
G174576 NA non-coding upstream 278166 497079 ~ 497372 (+)
G174562 NA non-coding upstream 314990 457883 ~ 460548 (+)
G174656 NA non-coding downstream 10770 790857 ~ 791140 (+)
G174662 NA non-coding downstream 34003 814090 ~ 814591 (+)
G174663 NA non-coding downstream 34695 814782 ~ 816038 (+)
G174666 NA non-coding downstream 40326 820413 ~ 820916 (+)
G174668 NA non-coding downstream 46809 826896 ~ 827476 (+)
CI01000037_00228809_00230442 NA other upstream 545142 228809 ~ 230730 (+)
G174949 NA other downstream 833789 1613876 ~ 1614274 (+)
CI01000037_01965864_01966433 COA5, CB064 other downstream 1185655 1965603 ~ 1966435 (+)
G176346 NA other downstream 2059673 2839760 ~ 2840053 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_037010 cd28 coding NC_007120.7 CM002893.2 13985567 ~ 13989879 (+)